Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00425 ATGAACTCCATTACCAGAAATCTTGCTCTGTTTTGGAGCTTCGCTTTCTTCTTTCACTTTCTTCTTCATTCTCCTGCTCTGGCTCTCAACGGCGATGCCACCCTCTTGATTTCTCTCAAGCGCTCCATTCTCGGAGATCCTTTGAATGTTTTGGCTAATTGGAATTTCAATGATGACACCCCCTGTTCTTGGCGTGGAGTCACCTGTACTGACCTTCAAACCGACGGTGGTGGCTGGACGGATTTCCTCAGAGTCACTGCCCTGTCCCTCCCCGGCAGTCAGCTTCTGGGTTCCATTCCGGATGAGCTTGGAATGATTGAACATCTTCGTCTTCTCGATCTTTCCGGTAATTTCTTTAATGGGTCTTTGCCGGTTTCCATTTTCAATGCTTCGGAGCTTCAGATTCTTTCTCTGTCCAATAATGTCATCTCCGGGGAGTTGCCGGTGGCTATTGGGGGTTTGAGGAGTCTTCAGGTTTTGAATCTGTCTGATAATGCGTTGGCTGGGAAAGTGCCCCGAAATCTCACTGCTCTGAGGAATCTTACTGTGGTTTCTTTGAGGAGTAATTACTTCACCGGAGAGATTCCGGGGAATTTCAGTTCGACGGAGGTTTTGGATCTGTCGTCTAATTTGCTTAATGGGTCTCTGCCGGCGGATTTTGGTGGGGAGAAACTGCGGTATTTGAACTTCTCTTACAATAAAATTTCAAGTTCGATTCCGGTGGAGTTCGCCGAGAAGATTCCGGCGAATGCAACAATGGATCTCTCTTTCAACAATCTCACCGGAGTAATTCCTCAGTCGACTGCTCTGCTCAACCAGAAAACAGAGGCGTTCGCCGGAAATGAAGATCTCTGCGGGAAGCCATTGAAGCATCTCTGTTCGATTCCTTCTTCACTCACAACTCCCCCAAATGTTTCTGATTCTTCATCTTCTTCTCCAGCTATCGCCGCCATACCCAAAACAATCGGCGCCATTCCGGCAACACAGTCCCTCGGAGGTCCAAATGGGACACGAACTCCTCCGCCCCGTAACGCCATGAAACCCATTACAATAGCCGCAATCGCCGTTGGAGACCTCGCCGGAGTCGCCATTCTCGCCGTCGTGATTCTCTACGTCTACCATCACCAGAAACAAAAAAACCCCAATTCCAAAACCCCGAAATCCACCGTGAAGAAGCCGCCGATTGGGTCACAACAAACCCTCCAAACTAATCAGAAAAAACCCTCGTCGGTGTTGTTCTGTTTACCCACCAAAGGCGAAGAGACATCAGAGGCAACGAGTTCCTCCGACGGCGAAGAACAAAGAGACAAACCAAGCACAACCCACGACGGAGAGAACAGAGAGAGTCAGAAAAACGGCGTTCTCGTTACAGTAGACGTAGAAACAGAGCTCGAATTGGAAACTCTGTTAAAGGCATCAGCGTATATACTCGGAGCGAGCGGCGGAAGCATTGTGTACAAGGCAGTGCTCGAGGACGGCACGGCGTTTGCCGTTCGAAGGATCGGCGACTGCGGCATTGAAAGCTTCAAGGATTTCGAGACCCAAGTGAGAGCCATCGCAAAGCTTCGACATCAAAATTTAGTAAAAATTCGAGGATTCTTCTGGGGAGAAGACGAGAAGCTCATCATCTACGACTATGTCTCCAATGGCTGCCTTGCATCCTCCATCCACAGAAAACCGAGTTCATCGTCTTCTTCCCAGAGCCATTTATCACTCGAAATCCGACTAAAAATCGCAAGAGGAATCGCCAGAGGACTGACCTTCATCCACGACAAGAAGCACGTCCATGGAAATCTCAAGCCGTCGAACATTCTCCTCAACGACGATATGGAGCCGTTAATCACCGATCTCGGCCTCGACAAGCTTCTCATCAGCGGCTCCAAAATCGCCCTTACCTCCGCCTCCACTCGAAACTTCGGCAGCCACAGATCCACACCGAATCGCGAGCACCAAGAGAGCAACGTCGGTAGCGCAATTAGCGGCGGAAGCCCGGGCGTGAGCTTGGTATCGGCATACCAGGCGCCAGAATCGCTGAGGAATCTGAAACCGAGCCCTAAATGGGACGTGTACTCGTTCGGAGTGATCTTGCTGGAGATTCTGAGCGGGAGAATCGTGACGGAGAGGGAGGCGAATCAATGGAACGGCGGTGATGATGAAGTACGGGTGAAGAAAATGATCGATTTGGTGATCAGAGAGGAAGTGGAAGGGAAAGATGAAGCAATGATCGGGATTTTTAGATTAGGGTTTAGGTGTGTTTGTTTCGTACCTCAGAAGAGACCAACCATGAAAGAAGCTCTGCAACAACTTGATCGAATTTCTTCCTCCATTTCTTCTTCACGCTAA 2343 49.59 MNSITRNLALFWSFAFFFHFLLHSPALALNGDATLLISLKRSILGDPLNVLANWNFNDDTPCSWRGVTCTDLQTDGGGWTDFLRVTALSLPGSQLLGSIPDELGMIEHLRLLDLSGNFFNGSLPVSIFNASELQILSLSNNVISGELPVAIGGLRSLQVLNLSDNALAGKVPRNLTALRNLTVVSLRSNYFTGEIPGNFSSTEVLDLSSNLLNGSLPADFGGEKLRYLNFSYNKISSSIPVEFAEKIPANATMDLSFNNLTGVIPQSTALLNQKTEAFAGNEDLCGKPLKHLCSIPSSLTTPPNVSDSSSSSPAIAAIPKTIGAIPATQSLGGPNGTRTPPPRNAMKPITIAAIAVGDLAGVAILAVVILYVYHHQKQKNPNSKTPKSTVKKPPIGSQQTLQTNQKKPSSVLFCLPTKGEETSEATSSSDGEEQRDKPSTTHDGENRESQKNGVLVTVDVETELELETLLKASAYILGASGGSIVYKAVLEDGTAFAVRRIGDCGIESFKDFETQVRAIAKLRHQNLVKIRGFFWGEDEKLIIYDYVSNGCLASSIHRKPSSSSSSQSHLSLEIRLKIARGIARGLTFIHDKKHVHGNLKPSNILLNDDMEPLITDLGLDKLLISGSKIALTSASTRNFGSHRSTPNREHQESNVGSAISGGSPGVSLVSAYQAPESLRNLKPSPKWDVYSFGVILLEILSGRIVTEREANQWNGGDDEVRVKKMIDLVIREEVEGKDEAMIGIFRLGFRCVCFVPQKRPTMKEALQQLDRISSSISSSR 780
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2456344 2459944 + Cp4.1LG01g02440.1 Cpe01g00425 461738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00425 780 MobiDBLite consensus disorder prediction 377 454 - -
Cpe01g00425 780 Gene3D Ribonuclease Inhibitor 198 295 IPR032675 -
Cpe01g00425 780 SUPERFAMILY Protein kinase-like (PK-like) 476 769 IPR011009 -
Cpe01g00425 780 SUPERFAMILY L domain-like 31 291 - -
Cpe01g00425 780 Gene3D Phosphorylase Kinase; domain 1 438 546 - -
Cpe01g00425 780 ProSiteProfiles Protein kinase domain profile. 471 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g00425 780 Pfam Protein kinase domain 477 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g00425 780 Gene3D Ribonuclease Inhibitor 29 197 IPR032675 -
Cpe01g00425 780 MobiDBLite consensus disorder prediction 428 449 - -
Cpe01g00425 780 MobiDBLite consensus disorder prediction 377 411 - -
Cpe01g00425 780 MobiDBLite consensus disorder prediction 636 661 - -
Cpe01g00425 780 Gene3D Transferase(Phosphotransferase) domain 1 547 779 - -
Cpe01g00425 780 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 24 773 - -
Cpe01g00425 780 PANTHER OS04G0122200 PROTEIN 24 773 - -
Cpe01g00425 780 Pfam Leucine rich repeat 108 167 IPR001611 GO:0005515
Cpe01g00425 780 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00425 Cpe14g00283 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00425 Cpe-Chr1:2456344 Cpe16g00149 Cpe-Chr16:3510721 0 dispersed
Cpe10g01174 Cpe-Chr10:8637226 Cpe01g00425 Cpe-Chr1:2456344 2.44E-91 dispersed
Cpe01g00425 Cpe-Chr1:2456344 Cpe14g00283 Cpe-Chr14:1648635 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62110 PF00069 Pkinase 5.50E-30 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00425 - - cmax:111478916 1371.68