Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00457 ATGGAGATTGATCTATCACTCAAAATTGATCATCACAAACAAGAACCGAACCAAGAACATCAAGAACAAGACGAACACGAAGAACACGAAGAACACGAAGCTTATCGAGTTCGAGAAAAAAAGGGAGTTGATGACACTGAAATTCATGTTGCTGCCTCTACTTTGAAAGTATTTTTGCCACAACACAACGTTAATGTAGGAGAGATCTCGGAGTTGCAAATGGAGATGAATCGTATGAAGGAAGAGAACAAGATGTTGAGAAAAGAAGTGGAACAAACCATGAAAGATTACTATGATCTTGAGATGAAAATTGCTATCATTCAACAAAACAATCTCCAAAAAAAGGACTCTCACAACTTTCTACCGAGCCACGAAAATGAAAACAAGAGGGTCGAAGAACCAAATAGAGAGCTCGAGCTCGGAGAAATGGCAAAGAAGAGACGAGTTCGATCGCCATCGAAGGACAACGAAATGAGAGAAAGCGAACTAGGGTTATCATTAGGGCTTCATACAAACAATGATTTGGAAGAAGATAATGATCATAAGGATCAAGAAGAAGAAACAAGAGAAAAGAGCAAAGAACATGTAACATCCAACATGAAGGCAATGCAACAAAGCAAGCCACAAAGGCCTGAGTTGCAAGGAATGGCACCTCCACACAATAGAAAAGCTAGGGTTTCTGTGAGAGCAAGATGTGAAGCTGCCACGATGAACGATGGTTGCCAATGGCGGAAATACGGTCAAAAAATTGCGAAGGGGAATCCATGCCCTCGAGCCTACTATCGTTGCACGGTTGCACCGGGATGCCCCGTTAGAAAACAGGTGCAAAGATGCTTAGAAGACATGTCGATACTGATAACAACGTACGAAGGAACACACAACCATCCGCTCCCTGTCGGAGCCACCGCCATGGCTTCAACGGCTTCGGCAGCCGCTTCGTTTACGCTATTAGACTCCACAAATCTCCCTCTTCCAAACCCTCAAAACCCTAATAATATTCTCAACTCCTCTTCCTATTCTGCAAACCCTAACCACCCCTCCGCCGGGCTCCTCCTCAACCTCACGGCCAACAACTTCTACGCTCCGATGGCCACCGCCTCCACCTCCGCCGCCCATAATTCCTATTATCAAAACAACTTTCAAGCTAATTTTTTTAGTCGTCCCCTTGATGGGCGGACTTGGAAATCGGCGGCGGAGGAGAATAAGCAGCCGCTGGTGGGGGAGAGTGTCTCCGCCATTGCTTCTGACCCCAAGTTTCGAGTGGCGGTGGCGGAAGCCATTTCGTCGCTCATTAACAAAGACGGCAACCTCACCGCACCCAATTCTGTCAAACGCTCTTCTTTTGGTACCGAAAAGGATGGCGACGGCGGCGATAGTGGCGGCGGGAACAACAGTTGGGTTGTCCAATCGCTCTCCACCAATGGTAATCTTTAA 1434 46.51 MEIDLSLKIDHHKQEPNQEHQEQDEHEEHEEHEAYRVREKKGVDDTEIHVAASTLKVFLPQHNVNVGEISELQMEMNRMKEENKMLRKEVEQTMKDYYDLEMKIAIIQQNNLQKKDSHNFLPSHENENKRVEEPNRELELGEMAKKRRVRSPSKDNEMRESELGLSLGLHTNNDLEEDNDHKDQEEETREKSKEHVTSNMKAMQQSKPQRPELQGMAPPHNRKARVSVRARCEAATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMASTASAAASFTLLDSTNLPLPNPQNPNNILNSSSYSANPNHPSAGLLLNLTANNFYAPMATASTSAAHNSYYQNNFQANFFSRPLDGRTWKSAAEENKQPLVGESVSAIASDPKFRVAVAEAISSLINKDGNLTAPNSVKRSSFGTEKDGDGGDSGGGNNSWVVQSLSTNGNL 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2637444 2640012 - Cp4.1LG01g01970.1 Cpe01g00457 461770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00457 477 MobiDBLite consensus disorder prediction 116 223 - -
Cpe01g00457 477 MobiDBLite consensus disorder prediction 173 197 - -
Cpe01g00457 477 Gene3D WRKY domain 222 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe01g00457 477 SUPERFAMILY WRKY DNA-binding domain 230 298 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe01g00457 477 MobiDBLite consensus disorder prediction 1 38 - -
Cpe01g00457 477 MobiDBLite consensus disorder prediction 435 477 - -
Cpe01g00457 477 SMART WRKY_cls 237 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe01g00457 477 Pfam WRKY DNA -binding domain 238 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe01g00457 477 MobiDBLite consensus disorder prediction 118 161 - -
Cpe01g00457 477 ProSiteProfiles WRKY domain profile. 232 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe01g00457 477 MobiDBLite consensus disorder prediction 462 477 - -
Cpe01g00457 477 Coils Coil 69 96 - -
Cpe01g00457 477 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 2 453 IPR044810 GO:0003700
Cpe01g00457 477 PANTHER WRKY TRANSCRIPTION FACTOR 9-RELATED 2 453 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00457 Cpe-Chr1:2637444 Cpe15g00738 Cpe-Chr15:7706728 4.93E-54 dispersed
Cpe06g00298 Cpe-Chr6:1636222 Cpe01g00457 Cpe-Chr1:2637444 8.32E-26 dispersed
Cpe01g00457 Cpe-Chr1:2637444 Cpe14g00304 Cpe-Chr14:1787695 7.48E-161 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
48752 PF03106 WRKY 1.90E-24 CL0274 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00457 - - cmo:103496139 483.411