Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00485 ATGGGCAAAGGGCCATTTTCTTTTCGCCGGAGTAATAGTCGTCGCCGCCCTAAGAAGGCAGCTCAGTCGACACCGTTGTTATCGCCTCAGACACCTCTGCCGATTGACGCCAGTTCTCCTCCCATTAACAATAATGGCAGCAGCTTGGTCGGTGGTGGCGGTGGTGGTGGTGGGGCTGTGGGAAAGGTGAAGAAGAAGGCTGGAGGAGCGAAGCTGTGGATGCGTCTCGACAGATGGGGGCAGTCGGAGCTTTTAGAGTGGGACAAGAGCGCAATAATCCGGCGTGCTGCAATTCCGGCTCGGGATTTGAGGATTCTTGGTCCTGTTTTCTCCCACTCCTCCAACATACTCGCAAGGGAAAAGGCCATGGTTGTTAATCTAGAGTTCATAAAAGCTATAGTTACTGCTGAAGAAGTCCTACTATTTGACCCTCTTCGCCAAGAGGTTATTCCATTTGTGGATCAGCTAAGGAAACTACTTGCTACGAAGAGTTCATCTCAGGGCCATGGAGATGGAACTGTGGATGAACGTGAAAATGATGTGAATGTTTCAAGTGGAGGAAAGTGGTTGCCAGTCTCCGAAGCTGCTGAAGGTGTGCAGTATGAGCTCCCGTTTGAGTTTCAGGTTCTGGAAAATGCGTTGGAGGTTGTATGTATGTATTTAGATTCCAGTGTGGAAGACCTTGAGAGAGATGCTTATCCAGTCCTTGATGAACTGGCTAGGAATGTCAGCACCAAGAATTTAGAACGTGTGAGGAGCTTGAAAAGTAATCTTACCCGTATTCTTGCACGCGTTCAAAAGGTGCGGGACGAGATAGAGCATCTATTAGATGACAATGAAGATATGGCACAACTATATTTGACAAGGAAATGGATGCAGAATCAACAGGCTGATGCTTTGCTGGGAGGTCTGGCTTCCAACAGCACCACAGCCATTGTTCCCCATCTTCGTCGACTTAGTTCCACCCGGAGCGGAAGTATGGTGACCAGCAATCTTCTTGATGATAATGATGTAGAGGATCTGGAAATGTTACTCGAGGCATATTTTATGCAGTTAGATGGGACTCGTAACAGGATATTATCGGTTAGGGAATACATCGATGACACCGAGGATTATGTCAATATTCAACTTGACAACCAACGAAATGAACTCATTCAGTTTCAGTTGACACTGACCATTGCTTCATTTGCCATAGCCATTGAAACCTTAATCGCCGGGTTGTTTGGCATGAACATCCATTGTACATTGTACGATCAGGAGGGGATATTCGAGTACTTCGTCGGAGGTACTTCAGTAGGTTGTTTGTTGATTTTCGTGCTTATTTTCGGGTATGCTAAATGGAAGAAGCTTCTTGGTTCATGA 1362 46.55 MGKGPFSFRRSNSRRRPKKAAQSTPLLSPQTPLPIDASSPPINNNGSSLVGGGGGGGGAVGKVKKKAGGAKLWMRLDRWGQSELLEWDKSAIIRRAAIPARDLRILGPVFSHSSNILAREKAMVVNLEFIKAIVTAEEVLLFDPLRQEVIPFVDQLRKLLATKSSSQGHGDGTVDERENDVNVSSGGKWLPVSEAAEGVQYELPFEFQVLENALEVVCMYLDSSVEDLERDAYPVLDELARNVSTKNLERVRSLKSNLTRILARVQKVRDEIEHLLDDNEDMAQLYLTRKWMQNQQADALLGGLASNSTTAIVPHLRRLSSTRSGSMVTSNLLDDNDVEDLEMLLEAYFMQLDGTRNRILSVREYIDDTEDYVNIQLDNQRNELIQFQLTLTIASFAIAIETLIAGLFGMNIHCTLYDQEGIFEYFVGGTSVGCLLIFVLIFGYAKWKKLLGS 453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2800338 2805646 + Cp4.1LG01g01730.1 Cpe01g00485 461798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00485 453 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 389 440 IPR045863 -
Cpe01g00485 453 MobiDBLite consensus disorder prediction 1 62 - -
Cpe01g00485 453 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 5 453 IPR039204 -
Cpe01g00485 453 Pfam CorA-like Mg2+ transporter protein 339 444 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cpe01g00485 453 Gene3D Magnesium transport protein CorA, transmembrane region 391 451 - -
Cpe01g00485 453 Gene3D - 61 144 - -
Cpe01g00485 453 PANTHER MAGNESIUM TRANSPORTER MRS2-4-RELATED 5 453 - -
Cpe01g00485 453 MobiDBLite consensus disorder prediction 23 50 - -
Cpe01g00485 453 Coils Coil 251 285 - -
Cpe01g00485 453 Gene3D Magnesium transport protein CorA, transmembrane region 150 384 - -
Cpe01g00485 453 CDD Mrs2_Mfm1p-like 73 450 IPR039204 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00485 Cpe-Chr1:2800338 Cpe12g00161 Cpe-Chr12:1043975 2.70E-109 dispersed
Cpe01g00485 Cpe-Chr1:2800338 Cpe14g00327 Cpe-Chr14:1953465 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00485 K16075 - csv:101203496 705.671