Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00487 ATGGAGAATCCGTTCTTTTCCGTTTTCCAAACAAACCCATGTTTGTTTCTGGATCAAAGATCAAATTTCATTGCCTTTCTTTTGATCTTCTTCTCTCTCACCTGCTCTTTCTCGCCCTCCTATGAATATGATTCCTTGGACCCTTATGCCAACGTTACTATCACATGGGATTTCTTGGTGGAGAATGGGGATACTTTTGATGTGAGAGTTTCGTTATACAATTACCAACTGTTTCGTCATGTGGAACTTCCTGGTTGGAAACTTGGCTGGTCATGGAAAGGTGATGAGGTTATATGGAGTATGTGGGGGGCAGAGGCTACTCAGCAAGGAAATTGCTCCAAATACATAGGCAAGGAGCTTCCTCATTGTTGTGAGAAGAAGCCTGTGATAGTTGATCTTATGCCTGGAGCTCCTTATAAGTTGCAGGTGGCCAATTGTTGTAAAGGAGGTGTGCTATCTTCCATGAGACAAGACCCTGCAAACTATGGAGCTGCCTTCCAAATGAATATCGGGAAGTCTGCTGGGAAGGGTGTAGATAGCAAAATGCCTGCAAATTTCACTCTGGGGCTTCCTGGCTATACTTGTAGTGACCCATTTCAAGTCTCTCCAACCAAGTTCAGTAAGGATGGCGGTCGTCGGTGGACACAAGTTCTAGAAACATGGAACGTGACATGTGTTTACTCGCAATTCCGATCATCACCAGCTCCGGGGTGCTGTGTTTCATTGTCATCCTTCTACAACAGCACCATCATTCCTTGCCCTCGGTGCAGCTGTGGCTGCCAAGGGCTAGAGGGAACGAAATGCGTCGAGTCAGGTGAAACTCCTTCTGTGTTGCAGCTTCCACATGAACACTACACTGCTGAAGTAGAACCATTGGTGAGGTGTTCACAGCATATGTGCCCAATAAGGGTGCATTGGCATGTGAAACAGAGCTATACACAGTATTGGAGGGTAAAGATAACCATCACAAATCTAAACTTTGCCAAGAACTACTCTCAATGGAGCTTAGTAGTGTTGCATCCCAACTTGAGGAATATTACTCAAGTTTTCAGCTTCAACTACAGCCCTCTCAATCAATATGGTCACATAAATGACACAGGGATGTTTTGGGGGATACAGTTCTACAATGATTTGATACTCACATCAGGAGAAAGAGGGAATGTTCAAACAGAGATGCTTCTCCAAAAAGATTCAGAAATTTTCACTTTCAGAGAAGGATGGGCGTTCCCAAGAAGAATTTTGTTCAATGGGGATGAATGTGTAATGCCACCTCCAGACCAATATCCAAGGCTCCCAAATGAAGCTCACAGGGCCATGGCCATGGCCGCCACGTTCAAGGTTTTCTTCTTTTTTTCTCTCTGTATTCTTATAACAGAGGAATTCAGTAGATGA 1392 44.32 MENPFFSVFQTNPCLFLDQRSNFIAFLLIFFSLTCSFSPSYEYDSLDPYANVTITWDFLVENGDTFDVRVSLYNYQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKKPVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFTLGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPAPGCCVSLSSFYNSTIIPCPRCSCGCQGLEGTKCVESGETPSVLQLPHEHYTAEVEPLVRCSQHMCPIRVHWHVKQSYTQYWRVKITITNLNFAKNYSQWSLVVLHPNLRNITQVFSFNYSPLNQYGHINDTGMFWGIQFYNDLILTSGERGNVQTEMLLQKDSEIFTFREGWAFPRRILFNGDECVMPPPDQYPRLPNEAHRAMAMAATFKVFFFFSLCILITEEFSR 463
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2811379 2814252 - Cp4.1LG01g01700.1 Cpe01g00487 461800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00487 463 PANTHER PROTEIN COBRA 33 449 IPR006918 GO:0010215|GO:0031225
Cpe01g00487 463 PIRSF COBRA 15 460 IPR006918 GO:0010215|GO:0031225
Cpe01g00487 463 Pfam COBRA-like protein 68 228 IPR006918 GO:0010215|GO:0031225
Cpe01g00487 463 PANTHER COBRA-LIKE PROTEIN 6 33 449 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00487 Cpe-Chr1:2811379 Cpe04g01449 Cpe-Chr4:11570360 2.75E-168 dispersed
Cpe01g00487 Cpe-Chr1:2811379 Cpe03g00975 Cpe-Chr3:7848729 2.82E-166 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00487 - - cmo:103496092 855.899