Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe01g00492 | ATGGGTTGCGTTTGTTGTAAGCCCTCTGCTATAGAGGATAGCAAGGAAAGTCCGAGGGAGAGGCTGTCGAACAAGACCGCGTCCGACCTGCAGGTGGCAAGAGTGACTTCGTCATCGAGGGAAGAAGCTTATCGATCTAAAGATCATCATGATGGTAATGATGTAAGAGTGACATTGATTAACAAGCAGGTGAATGGGTCGGGTCGATTGCAGAGTGAGATTTTTGAGAGGAAGAGGGAGAAGATGGAGCATATGGCTGCTCAACATCCTTCAATGGGGAGAATTCCGAAGGCAGCAGAGGGAGACCAAATTGCTGCAGGCTGGCCGCCGTGGCTGGCTGCAGTTGCTGGAGAGGCAATCAGAGGGTGGCTACCCCGACGAGCTGATTCTTTTGAGAAATTGGATAAAATTGGTCAAGGGACTTATAGTAATGTATATAGGGCTCGTGACCTTGACCAAAAGAAAATTGTTGCTTTGAAGAAAGTAAGGTTCGACAACCTGGAACCTGAGAGCGTCCGCTTTATGGCTAGGGAAATTCACATATTGCGTAGGCTCGATCATCCAAATGTGATAAAGCTGGAGGGTCTAGTTACGTCAAGGATGTCTTGCAGCCTCTATCTTGTATTTGAGTACATGGAACACGACTTGGCAGGACTTGCTTCACACCCTGGTGTGAAGTTTACAGAGGCACAGGTTAAATGTTACATGCAACAACTTTTGCGTGGACTTGATCATTGTCACAGTCACGGAGTTCTGCATCGTGATATAAAGGGTTCCAACCTTTTAATCGACAATAATGGCGTCTTGAAAATTGCAGACTTTGGTTTAGCAAGTTTTTTTGATATCCACCAAAATCAGCCGCTGACAAGTCGGGTTGTAACTCTTTGGTATAGACCGCCTGAGCTTTTACTCGGTGCTACTTATTACGGTACAGCTGTAGATTTGTGGAGTACTGGCTGCATACTTGCTGAATTGTATGCTGGGAAGCCCATTATGCCAGGAAGAACAGAGATTGGTCAAGGGACTTATAGTAATGTATATAGGGCTCGTGACCTTGACCAAAAGAAAATTGTTGCTTTGAAGAAAGTAAGGTTCGACAACCTGGAACCTGAGAGCGTCCGCTTTATGGCTAGGGAAATTCACATATTGCGTAGGCTCGATCATCCAAATGTGATAAAGCTGGAGGGTCTAGTTACGTCAAGGATGTCTTGCAGCCTCTATCTTGTATTTGAGTACATGGAACACGACTTGGCAGGACTTGCTTCACACCCTGGTGTGAAGTTTACAGAGGCACAGGTTAAATGTTACATGCAACAACTTTTGCGTGGACTTGATCATTGTCACAGTCACGGAGTTCTGCATCGTGATATAAAGGGTTCCAACCTTTTAATCGACAATAATGGCGTCTTGAAAATTGCAGACTTTGGTTTAGCAAGTTTTTTTGATATCCACCAAAATCAGCCGCTGACAAGTCGGGTTGTAACTCTTTGGTATAGACCGCCTGAGCTTTTACTCGGTGCTACTTATTACGGTACAGCTGTAGATTTGTGGAGTACTGGCTGCATACTTGCTGAATTGTATGCTGGGAAGCCCATTATGCCAGGAAGAACAGAGGTGGAGCAGCTACATAAAATATTTAAACTCTGTGGCTCTCCTTCAGAGGATTATTGGAGAAAATCAAGGCTGCCACATGCAACGATATTTAAGCCCCAACAGCCCTATAGACGCTGCGTTGCTGACACATTTAAGGATTTCCCTGCACCAGCTTTAGCTCTCATTGAGATGTTACTCTCTATAGATCCTGCTGATCGTGGCTCTGCCGCTCTTGCCCTTAAAAGCGAATACCCTCCGAGCAAAGAATTTGATGCCAAGATAAGGGATGAGGAAGCTAGAAGACAAGGAGCGGTAGGAAGCAAGGGACACCGACATGACCTGCAAAGGAAAGATAGAGAGTCTCGAGCTGTCCCTGCACCTGACGCCAATGCCGAGTTAGTCTCATCAATGCAGAAAAGACAATCCAATTCAAAGAGCCGGAGTGAAAAGTTTAATCCACATCCAGAAGAAGCTTCTGGCTTTCCAATTGATCCACCTCGACCATCACAAGGAGCAGAACGAACGGATTCTCAGGTGCGTCATCCTAAGAAAGCCTCACATTCAGGACCACTTGCTCAGCGGGCCGCTTGGGTAAAGGCTAGTAAGAACCCAGATGACGCTCCGAAAATCTCAACCGGGGCCGATACGTTCACAACTTCAGGACTAGTAGCACCTAGAAGAAGTATGCTGGGGGAAAAGTCTGACGCTTCACAAGGAGAGGTTAAAAAACTAATTGGCAGGTTTCCTGGTTCCTTCAAGGAAACCTCGGAATCCTCGATGCTACCCGACCAGAAGTTCTCAAATCACAGTATTGTAGGCTCACACGACAAAGAGCGGTGCAGCACCAAAGACCCTATAGTTGTGGGTTATGGCTCAAAGGGTCATAAGATTCATTACTCTGGTCCATTACTGGTTCCTTCTGGCAACATGGACCAAATGTTGAAGGACCACGATCGCCATATCCAAGAAGCAGTAAGACGAGCTCGGCTCGACAAGGCCAAGGCACGAAAGGTTCAAGTTGACGGGAAACAGATGTCGACAAATTCATTATTCGTCTCCGGTCGTTAA | 2661 | 46.26 | MGCVCCKPSAIEDSKESPRERLSNKTASDLQVARVTSSSREEAYRSKDHHDGNDVRVTLINKQVNGSGRLQSEIFERKREKMEHMAAQHPSMGRIPKAAEGDQIAAGWPPWLAAVAGEAIRGWLPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGVKFTEAQVKCYMQQLLRGLDHCHSHGVLHRDIKGSNLLIDNNGVLKIADFGLASFFDIHQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGVKFTEAQVKCYMQQLLRGLDHCHSHGVLHRDIKGSNLLIDNNGVLKIADFGLASFFDIHQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSRLPHATIFKPQQPYRRCVADTFKDFPAPALALIEMLLSIDPADRGSAALALKSEYPPSKEFDAKIRDEEARRQGAVGSKGHRHDLQRKDRESRAVPAPDANAELVSSMQKRQSNSKSRSEKFNPHPEEASGFPIDPPRPSQGAERTDSQVRHPKKASHSGPLAQRAAWVKASKNPDDAPKISTGADTFTTSGLVAPRRSMLGEKSDASQGEVKKLIGRFPGSFKETSESSMLPDQKFSNHSIVGSHDKERCSTKDPIVVGYGSKGHKIHYSGPLLVPSGNMDQMLKDHDRHIQEAVRRARLDKAKARKVQVDGKQMSTNSLFVSGR | 886 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 2843378 | 2849790 | + | Cp4.1LG01g01780.1 | Cpe01g00492 | 461805 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe01g00492 | 886 | SMART | serkin_6 | 337 | 616 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe01g00492 | 886 | SMART | serkin_6 | 131 | 335 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe01g00492 | 886 | MobiDBLite | consensus disorder prediction | 11 | 52 | - | - | |
Cpe01g00492 | 886 | ProSiteProfiles | Protein kinase domain profile. | 131 | 338 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe01g00492 | 886 | SUPERFAMILY | Protein kinase-like (PK-like) | 125 | 337 | IPR011009 | - | |
Cpe01g00492 | 886 | ProSitePatterns | Protein kinases ATP-binding region signature. | 338 | 361 | IPR017441 | GO:0005524 | |
Cpe01g00492 | 886 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 452 | 464 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe01g00492 | 886 | MobiDBLite | consensus disorder prediction | 630 | 745 | - | - | |
Cpe01g00492 | 886 | Gene3D | Transferase(Phosphotransferase) domain 1 | 212 | 336 | - | - | |
Cpe01g00492 | 886 | Pfam | Protein kinase domain | 131 | 334 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe01g00492 | 886 | Pfam | Protein kinase domain | 336 | 615 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe01g00492 | 886 | PANTHER | CELL DIVISION PROTEIN KINASE | 1 | 340 | - | - | |
Cpe01g00492 | 886 | Gene3D | Phosphorylase Kinase; domain 1 | 337 | 414 | - | - | |
Cpe01g00492 | 886 | PANTHER | CYCLIN-DEPENDENT KINASE | 338 | 868 | - | - | |
Cpe01g00492 | 886 | PANTHER | CYCLIN-DEPENDENT KINASE | 1 | 340 | - | - | |
Cpe01g00492 | 886 | CDD | STKc_CDK9_like | 337 | 615 | - | - | |
Cpe01g00492 | 886 | SUPERFAMILY | Protein kinase-like (PK-like) | 337 | 615 | IPR011009 | - | |
Cpe01g00492 | 886 | Gene3D | Phosphorylase Kinase; domain 1 | 131 | 211 | - | - | |
Cpe01g00492 | 886 | PANTHER | CELL DIVISION PROTEIN KINASE | 338 | 868 | - | - | |
Cpe01g00492 | 886 | MobiDBLite | consensus disorder prediction | 24 | 39 | - | - | |
Cpe01g00492 | 886 | ProSiteProfiles | Protein kinase domain profile. | 332 | 616 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe01g00492 | 886 | Gene3D | Transferase(Phosphotransferase) domain 1 | 415 | 650 | - | - | |
Cpe01g00492 | 886 | MobiDBLite | consensus disorder prediction | 630 | 656 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe01g00492 | Cpe01g01674 | CCT | |
Cpe01g00492 | Cpe14g00334 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g00492 | Cpe-Chr1:2843378 | Cpe16g00777 | Cpe-Chr16:7693043 | 1.08E-122 | dispersed | |
Cpe01g00492 | Cpe-Chr1:2843378 | Cpe14g00334 | Cpe-Chr14:2027755 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62113 | PF00069 | Pkinase | 3.00E-67 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe01g00492 | - | - | csv:101222182 | 1040.8 |