Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00534 ATGGGCAGTGAAAATTTTGGTTTATGGCTATTTTTTATTGCATCTCTTCAGTTTTTTATTAGAACACAGTGTACTATTGTGGGGATTACTTATGTTCGTGAACCTAGTGTCAAAGGAGCTGTTTGTTTGGATGGTAGCCCTCCAGCTTATCACTTGAGTGAAGGGTTAGGCGCTGGTGTTAACAATTGGTTGATTCAGCTAGAGGGAGGAGGATGGTGCAGCGATGTCAAGACTTGCGTCCTGCGTCGGGATACTCGTTTAGATTTTTATAACTGGAATAGAATCAAAATTCGATACTGCGATGGATCTTCGTTCACCGGAGACGTCGAAGCCGTTGATCCCGCAACCAATCTGCATTTCAGAGGAAAAAGAATTTTTCGGGCCGTGATCGATGATCTACTCGCCAAGGGAATGAAGAACGCGAAGAACGCTATTCTCTCGGGATGTTCGGCCGGTGGATTAGGTTCCATTTTGCATTGTGATATCTTCAAATCTTTACTTCCTCCTACTACCAAAGTAAAGTGTGTCTCAGATGCAGGATACTTCGTCAACGTGAAAGATGTCTCTGGAGCACAGCATATCGAGGAGTTCTTTAGCGATATAGTCGCCACTCATGGTTCAGCTAGGAATTTGCCTGTACAATGCACTTCAAAAATGAAACCCGAGTTGTGTTTCTTCCCCCAAAATGTGATTCAGCTCGTTCGGACTCCAATCTTTATTGTAAATGCAGCTTATGATTCATGGCAGGTAAGGAACATTCTGGTGCCCGGAGACATGGCTAAGAGCAGACTCTCCCAAGATCACCCATTGCAAAGGCGATTGGAGACTGGTTTTTCGACAGGAGTGTGTTCCAGAAGATCGATTGTCCATACCCGTGTAACCCGACATGCCATAACCGCATTTTTTAAACGAAATACGACCCCTAATGACGGGTTTATTAACACAGATTACGTTATTGTTTATAACAGAGAAAAAAAAAACACAAGTATACAGTTTGAATACAATGAAGCATCATTCATCAAGAGCTCGAAAATAAGAACGAAGGCTGTCGCTGCACCGAACTCGGGGTGTGTCGTCGTTGTCGTCGTCGTCTTCGATTGTTTGAATTGTGTATTAGCTTAG 1122 43.4 MGSENFGLWLFFIASLQFFIRTQCTIVGITYVREPSVKGAVCLDGSPPAYHLSEGLGAGVNNWLIQLEGGGWCSDVKTCVLRRDTRLDFYNWNRIKIRYCDGSSFTGDVEAVDPATNLHFRGKRIFRAVIDDLLAKGMKNAKNAILSGCSAGGLGSILHCDIFKSLLPPTTKVKCVSDAGYFVNVKDVSGAQHIEEFFSDIVATHGSARNLPVQCTSKMKPELCFFPQNVIQLVRTPIFIVNAAYDSWQVRNILVPGDMAKSRLSQDHPLQRRLETGFSTGVCSRRSIVHTRVTRHAITAFFKRNTTPNDGFINTDYVIVYNREKKNTSIQFEYNEASFIKSSKIRTKAVAAPNSGCVVVVVVVFDCLNCVLA 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3073852 3077131 + Cp4.1LG01g01410.1 Cpe01g00534 461847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00534 373 PANTHER NOTUM-RELATED 10 86 IPR004963 GO:0016787
Cpe01g00534 373 Pfam Pectinacetylesterase 88 261 IPR004963 GO:0016787
Cpe01g00534 373 Pfam Pectinacetylesterase 24 87 IPR004963 GO:0016787
Cpe01g00534 373 PANTHER NOTUM-RELATED 88 262 IPR004963 GO:0016787
Cpe01g00534 373 PANTHER PECTIN ACETYLESTERASE 7 88 262 - -
Cpe01g00534 373 PANTHER PECTIN ACETYLESTERASE 7 10 86 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00534 Cpe14g00434 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00534 Cpe-Chr1:3073852 Cpe04g00204 Cpe-Chr4:2120869 1.70E-91 dispersed
Cpe01g00534 Cpe-Chr1:3073852 Cpe14g00434 Cpe-Chr14:2728315 7.19E-112 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00534 K19882 - csv:101214431 451.44