Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe01g00536 | ATGGGATCCAGCGGGAGTAAACCGTCGTGCAGTTCGCTGCCGTCGCCGCCGCCGTCTTCATCGTCGTTGGCGGCGACTCTTTCGAGTTCCGGGAGAATCCGGAGGAGGAGATCCAAAGGCCGGAGAGTTTTCCAGTGTTCTTGCCTTGGGACGCTCTCTGGATCGCACCATAGCGACAATGACGATAATGATTGTGAAAGTGATAACAAAAAGAATGCTCATTATTGTTCATCTGCAAATCATACTGCTCAAGCATTAGATCAGAAGAAAATTGAGGGTTACAGAAGGGTCAAAGCTGAGGAGTCTGTTGAAGCACCTTGCGTAACGTCGAATGTTGAACTTGATGGATGGGATCAAACCGGTGGTGCTGTTACCGCCCCTAGAGCTGGTAGTACTTCTTCCCATGCAACCTCCCTCGAACCGTTGAAGTCTTCGAGTAACTTCCTTTCTCGCTTTAGTTTTGTTCCCGGTAATGTAAGCTTCAGACTGAGTAGAGCAAGCAGGTTAGGATCATCTAGATCTTATCCTTTGTCTTCAACTAATCTCTCAATGTTGAATGACGAAGACGGGCTTCGTTTGTCGAATGGACCTGTCGGAGGCTTGGATGATCGAGATGAAATGCAGCAAGGTAGGGACTCGCTTCCTGCGTCCTTAGCTAGTGCAACTCATACTCAGTATCATGGAGATGGTCCTGCTAATTTTAGGCTAAATACACTACCTTCTGATCTTTCTACTAACTTACAAGACAATCAGGCAGTTTCTTCTACCCACAATGTGGCTCGTGATTGTGATAATGCCCGAGTAGAGCCTGATGGAAACGTTTCCCATCCTCGAAATCTACCTGAAAATGAAAGCAGTGAGATTAGACAATCTGATAGACAGACTGGATCTAGGGAACCAGTTGAACAGAATTTTCGTTTCAGTCGGACCCTTAGCGTTGGAAGACTCCGAGATAGGGTTCTTCGTAGATCATCGTTATCTGACTTCACATTGTGTCCTCAGCAACAAGAGGGAGAGGAGAGAGATGCTAGTCAGAGTGGCGATGACCGACATGTTCGGACTGCTGAGACAAGGGCTTCATCATCTGAAGATAATGCTATGACCTCTCCAACAACGTCAGGTTATCCAGCTCCTAGTCTATCTAGTTCCCTGTTTAGCACCCAAGATAATGAAATGGAAACCACTCGGCCTCGAGAAGCTAGATATCACGATTTGCTCGAACACCGGTCAAATTTCCTTGAGCGGAGAAGACGAATACGTTCCCAGGTTCGTGCCCTACAGCGGTTGGGAAGTCGCTTTGAGAACCTATCTGGGCACGAGAGATCGTGTATATTATCTGGTCGACATAGGACGGGTCATTGTACTTGTCGTATCAATAATCGTGACACAAATGTAAATGATAACACTGATGCTAGAGCTAGTATATCAAGAATTGTAATGTTAGCTGAAGCCTTATTTGAGGTTCTGGATGAAATTCACCAGCAATCTGTAGTCTTATCGTCCCGTCCTGCATCTTCGATTGGCTCTCTGCCTGCTCCGAACGATATTGTAGATTCTATGCCCGTTAAATTTTATTCCAAGTTGCAAAAGCATCAAAACGAGGAAGCTGCCCAATGCTACATATGCCTGGTCGAGTACGATGAAGGAGACAGCATGAGAGTGTTGCCTTGCCATCATGAGTTTCACACAGCGTGTGTCGATAAGTGGCTGAAGGAAATCCACAGGGTATGTCCACTCTGTCGAGGTGACATATGCAGCAGATCAGATGCGTTACCAGACGATGTCATGTGA | 1791 | 46.51 | MGSSGSKPSCSSLPSPPPSSSSLAATLSSSGRIRRRRSKGRRVFQCSCLGTLSGSHHSDNDDNDCESDNKKNAHYCSSANHTAQALDQKKIEGYRRVKAEESVEAPCVTSNVELDGWDQTGGAVTAPRAGSTSSHATSLEPLKSSSNFLSRFSFVPGNVSFRLSRASRLGSSRSYPLSSTNLSMLNDEDGLRLSNGPVGGLDDRDEMQQGRDSLPASLASATHTQYHGDGPANFRLNTLPSDLSTNLQDNQAVSSTHNVARDCDNARVEPDGNVSHPRNLPENESSEIRQSDRQTGSREPVEQNFRFSRTLSVGRLRDRVLRRSSLSDFTLCPQQQEGEERDASQSGDDRHVRTAETRASSSEDNAMTSPTTSGYPAPSLSSSLFSTQDNEMETTRPREARYHDLLEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHERSCILSGRHRTGHCTCRINNRDTNVNDNTDARASISRIVMLAEALFEVLDEIHQQSVVLSSRPASSIGSLPAPNDIVDSMPVKFYSKLQKHQNEEAAQCYICLVEYDEGDSMRVLPCHHEFHTACVDKWLKEIHRVCPLCRGDICSRSDALPDDVM | 596 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 3080649 | 3084998 | + | Cp4.1LG01g01370.1 | Cpe01g00536 | 461849 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe01g00536 | 596 | MobiDBLite | consensus disorder prediction | 125 | 139 | - | - | |
Cpe01g00536 | 596 | MobiDBLite | consensus disorder prediction | 282 | 296 | - | - | |
Cpe01g00536 | 596 | Pfam | Ring finger domain | 538 | 581 | IPR001841 | - | |
Cpe01g00536 | 596 | MobiDBLite | consensus disorder prediction | 119 | 139 | - | - | |
Cpe01g00536 | 596 | ProSiteProfiles | Zinc finger RING-type profile. | 539 | 581 | IPR001841 | - | |
Cpe01g00536 | 596 | CDD | RING-H2_PA-TM-RING | 538 | 581 | - | - | |
Cpe01g00536 | 596 | MobiDBLite | consensus disorder prediction | 359 | 391 | - | - | |
Cpe01g00536 | 596 | MobiDBLite | consensus disorder prediction | 170 | 303 | - | - | |
Cpe01g00536 | 596 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 1 | 587 | - | - | |
Cpe01g00536 | 596 | MobiDBLite | consensus disorder prediction | 331 | 402 | - | - | |
Cpe01g00536 | 596 | MobiDBLite | consensus disorder prediction | 170 | 188 | - | - | |
Cpe01g00536 | 596 | MobiDBLite | consensus disorder prediction | 341 | 358 | - | - | |
Cpe01g00536 | 596 | SUPERFAMILY | RING/U-box | 517 | 592 | - | - | |
Cpe01g00536 | 596 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Cpe01g00536 | 596 | SMART | ring_2 | 539 | 580 | IPR001841 | - | |
Cpe01g00536 | 596 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Cpe01g00536 | 596 | MobiDBLite | consensus disorder prediction | 237 | 261 | - | - | |
Cpe01g00536 | 596 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 502 | 586 | IPR013083 | - | |
Cpe01g00536 | 596 | MobiDBLite | consensus disorder prediction | 213 | 227 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe01g00536 | Cpe14g00432 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g00536 | Cpe-Chr1:3080649 | Cpe18g00538 | Cpe-Chr18:5990311 | 7.81E-48 | dispersed | |
Cpe14g01037 | Cpe-Chr14:8713429 | Cpe01g00536 | Cpe-Chr1:3080649 | 6.82E-10 | dispersed | |
Cpe01g00536 | Cpe-Chr1:3080649 | Cpe14g00432 | Cpe-Chr14:2712147 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe01g00536 | - | - | cmax:111479412 | 1060.44 |