Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00542 AGAGAGAGAAGAGGAGAGAGAAAACTCCCCTTCCCTATTTCCTTCTTCCCTATATATATACCCCTTTCGTATTCCCTCCTTTCTTCACCAAACCATATCACAACCATGTTCTTCCCTTTCATCCTCGCCGCCGCCGCCGCCATCTTCTTCTTCTTCTTCTTCCATTCTCTTTTCAAATTCTCCGCCTCTGTTCGCCGGAAACCACCTCTTCCACCGGGCTCAATGGGCTGGCCTTACATCGGTGAAACCCTCCAACTCTACTCTCAAGATCCCAACGTCTTCTTTGCCTCCAAGAAGAAGAGATATGGTCCAATTTTCAAGTCCCACATATTGGGTTATCCTTGTGTGATGCTTTCAAGTCCCGAAGCTGTGAAATTTGTGTTGGTTACTAAAGCCCATCTCTTTAAGCCGACATTCCCAGCTAGTAAAGAAAGAATGTTGGGAAAAAATGGCATATTTTTTCACCAAGGTGAGTATCATGCCAAATTGAGACGCCTCGTCCTCCGAACATTCATGCCTGAGTCCATCAAAAACATCGTACCCACCATCGAATCCATCGCTAAGAACACCATACAATCATGGAATGGACAATTGATCAACACCTTCCAAGAAATGAAAATGTTCGCATTCGAGGTTTCTTTGCTATCAATATTTGGAAAAGATGAAGCTCTTTACTTCGAAGATCTTAAACGATGCTATTACATTCTTGAAAAAGGGTACAATTCGATGCCCATAAACTTGCCAAGAACACTCTTCCACGAGGCCATGAAAGCTAGGAAGGATCTAGCGCGTATCTTAAACAAGATCCTCACAACCAGGAGGGAAACGAAGCGGGATTACAACGACCTCCTCGGATCATTCATGAGCGAAAAGGAAGGCCTCACTGACGAACAGATAGCCGACAATGTCATCGGCATCATCTTCGCAGCTCGCGACACGACAGCGAGTGTTCTAACATGGATCTTGAAGTTCCTAGGAGAAAACCCAAGTGTTCTTCAAGCTGTTACCGATGAACAAGAAGCAATAATGAATGAAAAACAGAGTAGAGAAGATAATAATCTCACCTGGGGTGACGCGAAAAACATGCCGATTACTTCAAGGGTGATTCAAGAAACTCTAAGAGTTGCTTCGGTTTTGTCATTTACTTTCAGAGAAGCAGTGGAAGATGTTGAATTTGACGGGTATTTGATTCCAAAGGGATGGAAAGTTTTGCCTCTGTTCAGGAACATTCATCGTAGCTCTGAGAATTTTGCTCAGCCTGACAAGTTTGATCCTTCGAGATTTGAGGTGGCTCAGAAACCCAATACGTATATGCCATTTGGCAATGGGACCCACTCCTGTCCGGGAAATGAATTGGCCAAGCTGGAGATGTTGGTTTTACTCCATCATTTAACCACAAACTACAGGTGGAATGTAGTGGGAGATGAAGAAGGGATTCAATATGGTCCATTTGCTCTTCCCCACAACGGATTGCCCATTAGAATATCTCTCAAGAAA 1497 43.95 RERRGERKLPFPISFFPIYIPLSYSLLSSPNHITTMFFPFILAAAAAIFFFFFFHSLFKFSASVRRKPPLPPGSMGWPYIGETLQLYSQDPNVFFASKKKRYGPIFKSHILGYPCVMLSSPEAVKFVLVTKAHLFKPTFPASKERMLGKNGIFFHQGEYHAKLRRLVLRTFMPESIKNIVPTIESIAKNTIQSWNGQLINTFQEMKMFAFEVSLLSIFGKDEALYFEDLKRCYYILEKGYNSMPINLPRTLFHEAMKARKDLARILNKILTTRRETKRDYNDLLGSFMSEKEGLTDEQIADNVIGIIFAARDTTASVLTWILKFLGENPSVLQAVTDEQEAIMNEKQSREDNNLTWGDAKNMPITSRVIQETLRVASVLSFTFREAVEDVEFDGYLIPKGWKVLPLFRNIHRSSENFAQPDKFDPSRFEVAQKPNTYMPFGNGTHSCPGNELAKLEMLVLLHHLTTNYRWNVVGDEEGIQYGPFALPHNGLPIRISLKK 499
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3111400 3114082 - Cp4.1LG01g01170.1 Cpe01g00542 461855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00542 499 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g00542 499 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g00542 499 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g00542 499 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g00542 499 PANTHER CYTOCHROME P450 26 48 496 - -
Cpe01g00542 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Cpe01g00542 499 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g00542 499 PRINTS E-class P450 group I signature 99 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g00542 499 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g00542 499 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g00542 499 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g00542 499 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g00542 499 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g00542 499 PANTHER ABSCISIC ACID 8'-HYDROXYLASE CYP707A2 48 496 - -
Cpe01g00542 499 SUPERFAMILY Cytochrome P450 65 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g00542 499 Gene3D Cytochrome P450 61 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g00542 499 Pfam Cytochrome P450 71 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00542 Cpe14g00428 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00542 Cpe-Chr1:3111400 Cpe02g00180 Cpe-Chr2:920166 0 dispersed
Cpe01g00542 Cpe-Chr1:3111400 Cpe14g00428 Cpe-Chr14:2689691 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00542 K09843 - csv:101212508 816.224