Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00550 ATGGTAATGGCGGCCAGTTCCCTATCGAATCTGCCTTCCGCTGTCTTCAATGGAAACCTTCAGAAAAATGAATTTGGGTTTGTGGGTATGCCGCGACGACCCGCCAAGTATCTCAAATCCAATCGTAGAGGTCGTGTTCTTAGATGCCAATCAACTCAAGTTGATGAACCTAAAACTAAGAGAAATTTACTTGACAATGCAAGCAATCTTCTAACTAATTTGTTAAACGGTGGAAATCTTGGATCTATGCCGATAGCTGAAGGTGCAGTCTCTGATTTGTTTGGTCGCCCACTCTTTTTTGCACTATATGATTGGTTCTTAGAGCATGGATCTGTTTATAAACTTGCCTTTGGACCAAAAGCCTTTGTTGTTGTATCGGATCCCATTGTGGCAAGATATATTCTTCGAGAAAATGCATTTAGTTATGATAAGGGAGTGCTTGCTGATATTCTAGAACCCATAATGGGTAAAGGACTAATACCAGCTGACTTAGACACTTGGAAGCAGAGGAGACGAGTTATAGCTCCTGGATTCCACGCGTTATACTTGGAAGCTATGGCCAAAGTGTTCGCTGATTGTTCAGAACGATCGATACGAAAATTAGAGAAGCTTTTAGGAGAAGGTGAAGGTCAGGAGGATAAAACCATTGAGTTGGATATGGAAGCAGAGTTTTCAAATTTGGCTCTTGATATCATTGGACTTGGTGTTTTCAACTATGATTTTGGTTCTGTAACCAAGGAATCCCCAGTGATTAAGGCTGTATATGGAACCCTTTTTGAAGCAGAGCATAGATCAACTTTCTATATCCCATATTGGAAAGTACCTTTGGCAAGGTGGATAGTCCCAAGGCAACGTAAATTCCATAGTGACCTTAAGGTTATTAACGACTGTCTCGATGGCCTAATACGAAACGCAAGAGAAACCCGAGAGGAAGCCGATGTCGAGAAATTGCAGCAAAGGGACTATTTAAATCTTAAGGATGTCAGCCTTTTGCGTTTCTTAGTTGATATGCGGGGAGCTGATGTCGATGATCGACAGCTTAGGGATGATCTGATGACGATGCTTATTGCTGGCCATGAAACAACTGCTGCTGTGCTTACATGGGCTGTTTTTTTGCTTGCACAAAACCCTTCAAAAATGAAAAGAGCTCAAGAAGAGATTGATTTGGTTCTTGGCAAGGGAAGGCCAAATTTTGAATTACTCAAAGAATTGAAGTACATCAGACTTATCATTGCGGAGACTCTTCGTTTGTTTCCTCAACCACCATTGCTAATAAGACGAGCTCTCAAACCAGATACATTACCAGGAGGATATAATGGTGACAAAAATGGATATCCAATTCCTGCAGGGACTGACATCTTCATCTCTGTTTACAATCTCCATAGATCCCCATACTTCTGGGATAACCCTCAAGATTTCGAACCAGAGAGATTTCAGGTAAACAAAGTGAGCGATGGAATCGAAGGATGGGATGGTTTCGATCCTTCTAGAAGCCCGGGAGCTCTATACCCAAATGAGATTATATCAGACTTTTCCTTCTTGCCATTTGGAGGAGGACCTAGAAAATGTGTGGGAGATCAATTTGCTCTAATGGAGTCAACTATAGCACTGGCCATGTTGCTGCAGAAGTTTGATGTGCAACTAAAAGGAAGTCCAGAATCTGTGGAACTAGTCACTGGGGCTACCATACATACCAAAAGTGGGTTGTGGTGCAAACTGAGAAGAAGATCACAAGTAAATTGA 1743 41.82 MVMAASSLSNLPSAVFNGNLQKNEFGFVGMPRRPAKYLKSNRRGRVLRCQSTQVDEPKTKRNLLDNASNLLTNLLNGGNLGSMPIAEGAVSDLFGRPLFFALYDWFLEHGSVYKLAFGPKAFVVVSDPIVARYILRENAFSYDKGVLADILEPIMGKGLIPADLDTWKQRRRVIAPGFHALYLEAMAKVFADCSERSIRKLEKLLGEGEGQEDKTIELDMEAEFSNLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKVPLARWIVPRQRKFHSDLKVINDCLDGLIRNARETREEADVEKLQQRDYLNLKDVSLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKMKRAQEEIDLVLGKGRPNFELLKELKYIRLIIAETLRLFPQPPLLIRRALKPDTLPGGYNGDKNGYPIPAGTDIFISVYNLHRSPYFWDNPQDFEPERFQVNKVSDGIEGWDGFDPSRSPGALYPNEIISDFSFLPFGGGPRKCVGDQFALMESTIALAMLLQKFDVQLKGSPESVELVTGATIHTKSGLWCKLRRRSQVN 580
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3162198 3169100 + Cp4.1LG01g01250.1 Cpe01g00550 461863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00550 580 PANTHER CYTOCHROME P450 97B3, CHLOROPLASTIC 78 576 - -
Cpe01g00550 580 PRINTS P450 superfamily signature 357 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g00550 580 PRINTS P450 superfamily signature 409 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g00550 580 PRINTS P450 superfamily signature 514 523 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g00550 580 PRINTS P450 superfamily signature 523 534 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g00550 580 Gene3D Cytochrome P450 82 580 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g00550 580 PRINTS E-class P450 group I signature 106 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g00550 580 PRINTS E-class P450 group I signature 346 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g00550 580 PRINTS E-class P450 group I signature 366 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g00550 580 PRINTS E-class P450 group I signature 513 523 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g00550 580 PRINTS E-class P450 group I signature 523 546 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g00550 580 PANTHER CYTOCHROME P450 FAMILY 4 78 576 - -
Cpe01g00550 580 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 516 525 IPR017972 GO:0005506|GO:0016705
Cpe01g00550 580 SUPERFAMILY Cytochrome P450 94 576 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g00550 580 Pfam Cytochrome P450 106 566 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00550 Cpe-Chr1:3162198 Cpe14g00631 Cpe-Chr14:4046435 1.44E-144 dispersed
Cpe01g00550 Cpe-Chr1:3162198 Cpe09g00087 Cpe-Chr9:507970 4.40E-36 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00550 K24543 - csv:101210292 1045.03