Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00575 ATGGAGGACGATTCAGATCTCGACTTCAGCTTCACCAGCACCATCTCCACCTCCACCGCTCGCAGCAGCCTCGCTCGGAGCAGCTTAACTCTCAGCTTTAATGAATCCCGCGGCTCCTCCACCCTTAACCTCCGTCCCCACCGCCACTCCGACCCACACTGGTCCGCCATCAAAGCTGCCACTACTCTTTCCTCCGATGGCCACCTCCACCTCCGCCACCTGAAACTCATCAAACACCTCGGCACTGGCAACCTCGGCCGGGTTTTCCTCTGCCATTTGAGAGACAACGATCACGCCAATTTCGCCCTTAAGGTCGTTGACAGAGACGCTTTAAGTAACAAGAAGCTTTTGCAGGTTCAAACGGAATCCGAGATTCTCGCTTTGCTCGACAACCCTTTTCTCCCTACTCTCTACGCGCGTCTCGACGTCTCTCACTACACGTGCCTCCTTATTGACTATTGCCCAGCCGGTGACCTCCACTCTCTCCTCCGCAAACAGCCTGGAAACCGCCTCTCCGTTTCGGCGGCGAGATTCTTCGTCGCTGAGGTTCTGGTGGCGCTTGAGTATCTTCACGCGCTTGGGATTGTGTACCGGGATCTCAAGCCTGAGAACGTTCTTTTGCGTGAGGATGGCCACGTCATGCTCACTGATTTCGATTTGTGCTTTAAGTCTGACGTTGTCCCCACTTTTCACACGTCGACACAGCCGGGACCACAGGGTACTGCCTCCTGCTTTGGGAGGAGGACCGCGGCGGAGGAGATTGTCGGGGAGTTCGTGGCGGAGCCGACGACGGCCTTTTCCAAGTCATGTGTAGGAACTCATGAGTATTTGGCGCCTGAGTTGATAACCGGCGGTGGTCACGGAAACGCCGTCGACTGGTGGGCGTTTGGGGTGTTCATTTACGAGCTGCTACACGGAACGACGCCGTTTAAGGGAGTGAACAAGGAGGGTACGCTTAGAAACATAGCGTCTACAGAAGGGGTGAAGTTCAGGGCGGCGATGGAGGAAGAGGAAGGTATAGCAGAGGCAAGGGATCTGATAGAGAGACTACTGGTGAAAGATCCGGCGAGACGGTTGGGATCCGGGAAAGGGGCGACGGAGATCAAACGGCATCCATTCTTCAAAGGTATAAAATGGGCGTTAATCCGGATGTATCGACCGCCGGAGGTGTACGGATTGATGAGAAAAGCCAGATCACACGTGGGTGACGTCAACCACCGCACGCGGCGTCGGGGCTGGTGGAACTGGAGAAAGCTCAGTAACTATTTAATTAAAAACGGAAATTCCAGTAATACCAATACCAATTCCAATACCAATCATTACAGATTTAACGCCAAAAATAAAATGGCTTAA 1353 53.73 MEDDSDLDFSFTSTISTSTARSSLARSSLTLSFNESRGSSTLNLRPHRHSDPHWSAIKAATTLSSDGHLHLRHLKLIKHLGTGNLGRVFLCHLRDNDHANFALKVVDRDALSNKKLLQVQTESEILALLDNPFLPTLYARLDVSHYTCLLIDYCPAGDLHSLLRKQPGNRLSVSAARFFVAEVLVALEYLHALGIVYRDLKPENVLLREDGHVMLTDFDLCFKSDVVPTFHTSTQPGPQGTASCFGRRTAAEEIVGEFVAEPTTAFSKSCVGTHEYLAPELITGGGHGNAVDWWAFGVFIYELLHGTTPFKGVNKEGTLRNIASTEGVKFRAAMEEEEGIAEARDLIERLLVKDPARRLGSGKGATEIKRHPFFKGIKWALIRMYRPPEVYGLMRKARSHVGDVNHRTRRRGWWNWRKLSNYLIKNGNSSNTNTNSNTNHYRFNAKNKMA 450
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3331191 3332543 + Cp4.1LG01g00900.1 Cpe01g00575 461888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00575 450 PANTHER FLIPPASE KINASE 1-RELATED 3 408 - -
Cpe01g00575 450 Gene3D Transferase(Phosphotransferase) domain 1 158 387 - -
Cpe01g00575 450 PANTHER SERINE/THREONINE-PROTEIN KINASE WAG1 3 408 - -
Cpe01g00575 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Cpe01g00575 450 CDD STKc_phototropin_like 72 390 - -
Cpe01g00575 450 SUPERFAMILY Protein kinase-like (PK-like) 50 395 IPR011009 -
Cpe01g00575 450 ProSiteProfiles Protein kinase domain profile. 74 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g00575 450 SMART serkin_6 74 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g00575 450 Gene3D Phosphorylase Kinase; domain 1 73 157 - -
Cpe01g00575 450 Pfam Protein kinase domain 76 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00575 Cpe14g00392 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00575 Cpe-Chr1:3331191 Cpe11g01082 Cpe-Chr11:9033317 4.37E-117 dispersed
Cpe01g00575 Cpe-Chr1:3331191 Cpe14g00392 Cpe-Chr14:2415706 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62117 PF00069 Pkinase 2.40E-52 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00575 - - bhj:120087146 721.079