Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00578 ATGTTTGGGATGCGAGTTAGAATAGCTCTGGCTGAGAAGGGCGTGGCGTACGAATACGTGGAAGAAGATCTGAGAAACAAGAGCCCTTTGCTTGTGCAGATGAACCCAATTCACAAGAAAATCCCTGTTCTTGTTCATAATGGAAAACCCATCTCCGAATCTTCCATTATCGTTCAGTACATCGATGAAACCTGGAAGGACAGAGCTCCTCTGTTACCGTCTGATCCATACGAGAGGGCTCAAGCCAGGTTTTGGGTGGATTTCATCGACAAGAAGGAAGTGAAACTGTTGGACTTTTGGGGCGGCATGTTCGGGATGCGAGTAAGAATCGCCCTGGCCGAGAAGGGCGTGGCCTACGAATATGTGGAACAAGATCTAAGAAACAAGACCCCTTTGCTTGTGCGGATGAACCCAATTCACAAGAGAGTACCTGTTCTTGTTCATAATGGAAAACCCATCTCTGAATCTTCCATCATCGTTCAGTATATTGATGAAACCTGGAAGGACAGAGCTCCTCTGTTGCCGTCTGATCCTTACCAGAGGGCTCAGGCCAGGTTTTGGGTGGATTTCATCGACAAGAAGGAGGTGAAACTGTTGGATTTTTGGCCCAGCATGTTCGGGATGCGTGTTAGAATAGCTCTGGCTGAGAAGGGCGTGGCCTACGAATATGTGGAACAAGATCTGAAAAACAAGACCCCTTTGCTTCTGGAGATGAATCCAATTCACAAAAAGGTACCTGTTTTTGTTCATAATGGAAAACCCATCACTGAATCTTCCATTATCATTCAGTACATCGATGAAGTATGGAAGGAGAATCCTCCTCTGTTGCCATCTGATCCTTACGAGATGGCTGAAGCCAGGTTCTGGGTGGATTTCATCGACAAGAAGCTTTACATTGAAACAAGGAAGATATACATGAGCAAGGGAGAAGAGCAGGAGACAGGCAAGAGGGAGGTGATAGCCATTTTGAAGCAAGTGGAAGAAGTTCTTGGGGAGAGGGCCTACTTTGGAGGAGAGTGTTTGGGGTTCATAGACATTGCCTTGATTGGATTCTCATCTTGGTTTTATAGCTATGAAACCATTGGGAATTTCAGCATTGAAGCTGAGTGTCCCAAGATCATGGCTTGGGTGAAGAGATGCCTGCAAAAGGAGAGCGTTTCAAGCTCCCTGCCTGACCCCATCAAATCAGGAAAGCACTTGGCCTTGACTAACCAAACTGCTTCAGTCAGGAAGGACTTGGTGCGGATCAAAATGGATGAAATTTTTAGTCGGCGCTCTCCCTTCGAGTTTCATCTTCCCCATTTGGCAACAATGGCAGAGGAAGTGAAGCTCTTGGACTTCTGGCCCAGCATGTTCGGGATGCGAGTCAAAGTAGCCCTGGCCATGAAGGGCGTGGCGTACGAATACGTAGAACAAGATCTTAGAAACAAGAGCCCTCTGCTTCTGGAAATGAACCCAATCCACAAGAAAATCCCTGTTCTTGTTCATAACGGAAAACCCATCTGCGAATCATCCATTATCGTTCAGTACATCGATGAAACGTGGAAGAACAGAGCTCCTCTGTTACCATCTGATCCATACGAGAGGGCTGAAGCCAGGTTTTGGGTGGATTTCATCGACAAGAAGGTGTTTGATAGTGGGAGGAAGATCTGGGCGAGCAAGGGAGAGGAACGTGAAGAAGGGAAGAAGGAGTTCATGGGAAGCTTGAAGAAGCTGGAGGAAGTTCTTGGGGAGAAGGCTTACTTTGGAGGTGAGAGTATGGGGTTTGTGGACATTGTTCTGATTGGATACTACACCTGGTTTTACAGCTACGAGAGCATTGGGAACTTCAGCGTTGAGGCTGAGTGCTCCAAGATAATGGGATGGGCTAAGAGATGCTTGCAAAATGAGATCGTTTCCAACTCCCTGCCTGACCCCTTCAAGATCTGTGACTTTGTGCTTCTAATGAAGAAGAATTTTGAAATTTTTTACCGTCTTGTTCTCACTTGGCGTATGTCGTGGCCGCCGCCTTGGTTTCCCTTTCCTCCACCCGATTGGCGTGGTTACACGCCTCTACAGAGCTCGTCTCCTTCACGGATCCGCTTCAACATCCTCCATTGTTGCACAATGAGTTCATCACAAGAGCTGGTTTTGTTGGACTTACGGGCTAGCCCTTTTGCCACGAGGGTGAGGGTGGCTTTGGCAGAGAAGGGGCTAACCTTCGAGACAAAACAGGAAGATTTGAGTAACAAAACTCCTCTGCTTCTGGAGATGAACCCTGTACACAAGCAAATCCCTGTTTTGATTCACAAAGGCAACCCCATTCTCGAGTCTATCATAATCCTTGAATACATCGACGAGACATGGAGCAGTGAGGCAGGCTATGCTAATTTGCTTCCTTCTCGTCCTTACGACAGATCCCACGCTAGATTTTGGGCTGACTATGTGGACAAGAAGATTTACCCAATTGGAGGGAAGCTATGGAACAAAAAGGATCTGACAGAGGAGGAGAAGGAAGCGGCAATGAAGGAGCTGCTGGGGAGCTTCAAGCAGCTGGAGGAAGAGCTTGGAGACAAGCCCTATTTTGGAGGCCAATCATTTGGTTCCACCAGCCCCGACGCCGCGTGCGGTGGT 2613 47.68 MFGMRVRIALAEKGVAYEYVEEDLRNKSPLLVQMNPIHKKIPVLVHNGKPISESSIIVQYIDETWKDRAPLLPSDPYERAQARFWVDFIDKKEVKLLDFWGGMFGMRVRIALAEKGVAYEYVEQDLRNKTPLLVRMNPIHKRVPVLVHNGKPISESSIIVQYIDETWKDRAPLLPSDPYQRAQARFWVDFIDKKEVKLLDFWPSMFGMRVRIALAEKGVAYEYVEQDLKNKTPLLLEMNPIHKKVPVFVHNGKPITESSIIIQYIDEVWKENPPLLPSDPYEMAEARFWVDFIDKKLYIETRKIYMSKGEEQETGKREVIAILKQVEEVLGERAYFGGECLGFIDIALIGFSSWFYSYETIGNFSIEAECPKIMAWVKRCLQKESVSSSLPDPIKSGKHLALTNQTASVRKDLVRIKMDEIFSRRSPFEFHLPHLATMAEEVKLLDFWPSMFGMRVKVALAMKGVAYEYVEQDLRNKSPLLLEMNPIHKKIPVLVHNGKPICESSIIVQYIDETWKNRAPLLPSDPYERAEARFWVDFIDKKVFDSGRKIWASKGEEREEGKKEFMGSLKKLEEVLGEKAYFGGESMGFVDIVLIGYYTWFYSYESIGNFSVEAECSKIMGWAKRCLQNEIVSNSLPDPFKICDFVLLMKKNFEIFYRLVLTWRMSWPPPWFPFPPPDWRGYTPLQSSSPSRIRFNILHCCTMSSSQELVLLDLRASPFATRVRVALAEKGLTFETKQEDLSNKTPLLLEMNPVHKQIPVLIHKGNPILESIIILEYIDETWSSEAGYANLLPSRPYDRSHARFWADYVDKKIYPIGGKLWNKKDLTEEEKEAAMKELLGSFKQLEEELGDKPYFGGQSFGSTSPDAACGG 871
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3332404 3339049 - Cp4.1LG01g00840.1 Cpe01g00578 461891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00578 871 SFLD Main (cytGST) 2 91 - -
Cpe01g00578 871 SFLD Main (cytGST) 706 861 - -
Cpe01g00578 871 SFLD Main (cytGST) 193 406 - -
Cpe01g00578 871 SFLD Main (cytGST) 438 654 - -
Cpe01g00578 871 Gene3D Glutaredoxin 695 794 - -
Cpe01g00578 871 CDD GST_N_Tau 442 515 - -
Cpe01g00578 871 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 93 194 - -
Cpe01g00578 871 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 707 786 IPR004045 -
Cpe01g00578 871 SUPERFAMILY Thioredoxin-like 2 92 IPR036249 -
Cpe01g00578 871 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 440 519 IPR004045 -
Cpe01g00578 871 Coils Coil 828 848 - -
Cpe01g00578 871 SUPERFAMILY Thioredoxin-like 709 814 IPR036249 -
Cpe01g00578 871 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 92 IPR045073 -
Cpe01g00578 871 SUPERFAMILY GST C-terminal domain-like 513 651 IPR036282 -
Cpe01g00578 871 SUPERFAMILY Thioredoxin-like 442 543 IPR036249 -
Cpe01g00578 871 Gene3D Glutaredoxin 193 278 - -
Cpe01g00578 871 Gene3D Glutaredoxin 1 74 - -
Cpe01g00578 871 Gene3D Glutaredoxin 438 524 - -
Cpe01g00578 871 Gene3D Glutaredoxin 91 176 - -
Cpe01g00578 871 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 92 - -
Cpe01g00578 871 SUPERFAMILY GST C-terminal domain-like 267 393 IPR036282 -
Cpe01g00578 871 CDD GST_C_Tau 280 393 IPR045074 GO:0004364|GO:0006749
Cpe01g00578 871 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 194 273 IPR004045 -
Cpe01g00578 871 CDD GST_C_Tau 526 649 IPR045074 GO:0004364|GO:0006749
Cpe01g00578 871 SUPERFAMILY GST C-terminal domain-like 791 861 IPR036282 -
Cpe01g00578 871 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 795 871 IPR010987 -
Cpe01g00578 871 SFLD Main.3: Omega- and Tau-like 438 654 IPR045073 -
Cpe01g00578 871 SFLD Main.3: Omega- and Tau-like 193 406 IPR045073 -
Cpe01g00578 871 SFLD Main.3: Omega- and Tau-like 706 861 IPR045073 -
Cpe01g00578 871 CDD GST_N_Tau 1 65 - -
Cpe01g00578 871 SFLD Glutathione Transferase (cytosolic) 2 91 IPR040079 -
Cpe01g00578 871 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 441 649 - -
Cpe01g00578 871 CDD GST_N_Tau 196 269 - -
Cpe01g00578 871 CDD GST_N_Tau 709 782 - -
Cpe01g00578 871 Gene3D - 525 656 - -
Cpe01g00578 871 Gene3D - 795 869 - -
Cpe01g00578 871 Gene3D - 279 409 - -
Cpe01g00578 871 Pfam Glutathione S-transferase, N-terminal domain 2 63 IPR004045 -
Cpe01g00578 871 Pfam Glutathione S-transferase, N-terminal domain 195 267 IPR004045 -
Cpe01g00578 871 Pfam Glutathione S-transferase, N-terminal domain 93 165 IPR004045 -
Cpe01g00578 871 Pfam Glutathione S-transferase, N-terminal domain 441 513 IPR004045 -
Cpe01g00578 871 Pfam Glutathione S-transferase, N-terminal domain 709 780 IPR004045 -
Cpe01g00578 871 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 279 408 IPR010987 -
Cpe01g00578 871 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 708 861 - -
Cpe01g00578 871 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 195 399 - -
Cpe01g00578 871 SUPERFAMILY Thioredoxin-like 195 298 IPR036249 -
Cpe01g00578 871 CDD GST_N_Tau 94 167 - -
Cpe01g00578 871 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 92 171 IPR004045 -
Cpe01g00578 871 Pfam Glutathione S-transferase, C-terminal domain 553 628 IPR004046 -
Cpe01g00578 871 Pfam Glutathione S-transferase, C-terminal domain 309 383 IPR004046 -
Cpe01g00578 871 SUPERFAMILY Thioredoxin-like 93 193 IPR036249 -
Cpe01g00578 871 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 525 653 IPR010987 -
Cpe01g00578 871 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 708 861 IPR045073 -
Cpe01g00578 871 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 93 194 IPR045073 -
Cpe01g00578 871 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 195 399 IPR045073 -
Cpe01g00578 871 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 441 649 IPR045073 -
Cpe01g00578 871 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 69 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00578 Cpe-Chr1:3332404 Cpe10g00926 Cpe-Chr10:5174956 5.40E-31 dispersed
Cpe01g01970 Cpe-Chr1:16862570 Cpe01g00578 Cpe-Chr1:3332404 4.94E-34 transposed
Cpe01g00578 Cpe-Chr1:3332404 Cpe14g00390 Cpe-Chr14:2406631 2.49E-27 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00578 K00799 - csv:101217848 365.155