Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00580 ATGATGTCAAGCAGCAATATGGGGCTGCGTTTTTTGTCATACCCACAAAGGAATCTGCTTATGAAGCTCTCATCTATGCCCCCAGTGGCTGCAATTGCCAGCTTCGGGACTATCAAAAGGGCTATGGCTTGCAGGCGTGTTCGTTGTCATTTGAACTTGGATGATTCCAGCAGCAAGAAGAGGCAGCTGGAAAGGGTTTGTTCCGCCAATTCAAATGGGAAATTTAGCAATAAAGAGTTCATTAGTGTTGACTCACGGCTTTATGAGTATATCCTCTCCAATGTTCGAGAGCCTGAGATCTTGGGGCAACTTCGTGAGGAGACCGCCTCATTGCGTGGTAGCAAAATGCAGGTATCGCCTGATCAAGCACAACTTCTTGCAATGATTGTTCAAATTCTCGGTGCAAAGCGGTGCATCGAAGTGGGTGTTTACACTGGATATTCATCTCTGGCCGTAGCGTTAGTCCTTCCAGAATCAGGGCGCTTAGTTGCCTGTGAAAGGGATGCCATATATCTAGATGTTGCTAGAAAATATTATGAACTTGCCGGTGTTTCTCACAAGGTGGATGTGAGACATGGGCTTGCAGCAGATACACTCAAATCACTTATTGCAAATGGTGAAGCTGGCAGTTATGATTTTGCGTTCATCGATGCCGAGAAGAGGATGAACGAGGAGTACTTCGAACTGCTACTGCAACTGGTGAGAGTTGGAGGTATAATTGTGATTGACAATGTCCTTTGGTATGGAAGAGTAGCTGACCCAACGGTAAATGACAAGCAGACTGATAGCATTAGGAGATTGAATAAAAAGATAATGGAAGACGATCGAGTCGGGATTAGTATAGTACCCATTGGCGATGGCATGACAATTTGCCAGAAGAGATGA 885 45.2 MMSSSNMGLRFLSYPQRNLLMKLSSMPPVAAIASFGTIKRAMACRRVRCHLNLDDSSSKKRQLERVCSANSNGKFSNKEFISVDSRLYEYILSNVREPEILGQLREETASLRGSKMQVSPDQAQLLAMIVQILGAKRCIEVGVYTGYSSLAVALVLPESGRLVACERDAIYLDVARKYYELAGVSHKVDVRHGLAADTLKSLIANGEAGSYDFAFIDAEKRMNEEYFELLLQLVRVGGIIVIDNVLWYGRVADPTVNDKQTDSIRRLNKKIMEDDRVGISIVPIGDGMTICQKR 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3351653 3355070 - Cp4.1LG01g00860.1 Cpe01g00580 461893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00580 294 Gene3D Vaccinia Virus protein VP39 68 294 IPR029063 -
Cpe01g00580 294 Pfam O-methyltransferase 95 293 IPR002935 GO:0008171
Cpe01g00580 294 PANTHER CATECHOL O-METHYLTRANSFERASE DOMAIN-CONTAINING PROTEIN 1 69 294 - -
Cpe01g00580 294 CDD AdoMet_MTases 137 242 - -
Cpe01g00580 294 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 88 294 IPR029063 -
Cpe01g00580 294 PANTHER O-METHYLTRANSFERASE-RELATED 69 294 - -
Cpe01g00580 294 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 77 294 IPR002935 GO:0008171
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00580 Cpe-Chr1:3351653 Cpe09g00585 Cpe-Chr9:4041929 9.48E-08 dispersed
Cpe01g00580 Cpe-Chr1:3351653 Cpe15g00488 Cpe-Chr15:5859248 6.27E-49 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00580 - - csv:101219267 472.626