Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00590 ATGACGCAAGATTATCCAAAGAAGGAGGCCAAGAAGATCAACTTTTTTACCGAATATGGGGATGCTAATAGATATAAGATTCTTGAAGTTATAGGCAGGGGAAGTTACGGAGTTGTTTGTTCTGCTATAGACATGCAAACCAAAGAGAAAGTTGCAATAAAGAGAATTCATGATATATTTGATCATGTATCTGATGCTGTTCGAATCCTTCGTGAAGTTAAGTTGCTTAGATTGTTGCGGCATCCTGATATTGTTGATATCAAGCACATCATGTTGCCACCTTCTAAAAAGGAATTTAAGGACATTTATGTGGTGTTTGAGCTTATGGAATCTGATCTTCATCAAGTTATTAAAGCAAATGATGATTTGACCCGTGAACATCATCAGTTTTTCCTCTATCAAATGCTACGTGCATTGAAATTCATGCATACAGCAAATGTCTATCATAGAGATCTGAAGCCGAAGAATATACTGGCAAATGCTAATTGCAAGCTTAAAGTTTGTGATTTTGGACTTGCTAGAGCTGCTTTCAGTGATGTCCCAACTACAATATTTTGGACAGACTATGTTGCTACTAGATGGTATAGAGCTCCAGAGCTGTGTGGATCGTTCTGTTCAAAGTATACTCCCGCGATAGATATTTGGAGCATTGGCTGCATATTTGCTGAGGTTTTGATAGGGAAGCCACTGTTTCCTGGTAAAAGTGTTGCCCATCAACTGGAGTTGATTACTGATCTTCTTGGGACTCCTTCATTGGAAATCATTGCAGGAGTTCGGAACGAAAAGGCCAGGAAATATTTGACCGAAATGAGAAAGAAATCTCCAGTGCCGTTTTCACAAAGATTTCCCAATGCGGATCCTGCAGCCATCCGCTTATTACAAAGACTATTAACATTTGATCCGAAGGATCGACCATCCGCTGTGGAGGCTCTGGCTGATCCTTACTTTAAGGGCCTAGCTAAAGTTGATAGAGAGCCTTCTTGTCAGCCAATATCAAGAGTGGAATTTGAGTTTGAGAGACGGAAATTAACAAAGGATGACATAAGGGAACTATTATACAGAGAAATATTAGAATATCATCCTCAAATTCGTGAAGATTATTTGAATAGAACTGAGACTACAAAGCTCCTCTATCCTAGTACTCCTATCATTGTCAGCGTTACAGGTCATTTTAGAAGACAATTCACCTACCTCAAGGAGAATGGTGCTAAAAGCGCACCGGTTTTGCCTCTAGAACGGAAACACTTCTCCCTCCCACGGTCCACGGTTTGCACAAATTTGGATTCACCTGATCGTGAACCGGTTCGGCGAAATCCGAAAGTCTCTAATAACAGCATGGGATTATCTGATAGAAAATTTGGGAATCCATCAAAGGCTCATCCTCCTCCCAAAGTGCCTACTGGACGAGTTTCCGGGCCCGTTCTCCCATACAAGAACAGAAACATAACAAATGTTTATTCGAGACTAACGTCACAAATTAGAAGTTTGGATTTGTGA 1497 40.41 MTQDYPKKEAKKINFFTEYGDANRYKILEVIGRGSYGVVCSAIDMQTKEKVAIKRIHDIFDHVSDAVRILREVKLLRLLRHPDIVDIKHIMLPPSKKEFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKFMHTANVYHRDLKPKNILANANCKLKVCDFGLARAAFSDVPTTIFWTDYVATRWYRAPELCGSFCSKYTPAIDIWSIGCIFAEVLIGKPLFPGKSVAHQLELITDLLGTPSLEIIAGVRNEKARKYLTEMRKKSPVPFSQRFPNADPAAIRLLQRLLTFDPKDRPSAVEALADPYFKGLAKVDREPSCQPISRVEFEFERRKLTKDDIRELLYREILEYHPQIREDYLNRTETTKLLYPSTPIIVSVTGHFRRQFTYLKENGAKSAPVLPLERKHFSLPRSTVCTNLDSPDREPVRRNPKVSNNSMGLSDRKFGNPSKAHPPPKVPTGRVSGPVLPYKNRNITNVYSRLTSQIRSLDL 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3410930 3415022 - Cp4.1LG01g00610.1 Cpe01g00590 461903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00590 498 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Cpe01g00590 498 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cpe01g00590 498 MobiDBLite consensus disorder prediction 422 474 - -
Cpe01g00590 498 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 10 447 - -
Cpe01g00590 498 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Cpe01g00590 498 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 10 447 - -
Cpe01g00590 498 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g00590 498 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Cpe01g00590 498 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g00590 498 SUPERFAMILY Protein kinase-like (PK-like) 20 321 IPR011009 -
Cpe01g00590 498 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g00590 498 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00590 Cpe-Chr1:3410930 Cpe04g00845 Cpe-Chr4:7825050 0 dispersed
Cpe01g00590 Cpe-Chr1:3410930 Cpe14g00375 Cpe-Chr14:2297757 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62118 PF00069 Pkinase 2.30E-64 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00590 - K04371 csv:101213897 901.353