Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00593 TTCTGGAAAGTGGAACTAAACCCTAACCCGACCCGAGAGACGAGCTCAAAGGCGGACCGGGCTGACCTTTCTATTATCAGAAAGTTCGACGCCGATCTCTGCACCGTCTTCATGTTGTGCGTTCGTCCCGTTTCTCAGCTTTCTCCTTCCAACCCTAATTTTCGCTGCGAGAAAATGGCTATGAGGAGATTGCTACTATTTCTTAAGCCATTTGATGCCAATCCCGTTCTCCATTCTGACGGCTTTTCTCGCGTCACCAGCCCTCAGATCTTACGTCACTTAGAGAACAGGCATGCAGTGCACAGGGAGGCCATAAAATTTTGTAAGGATGTTTTGCAGCAGAAGCCTGTGGATTGGGAAGCTGTATTTCGCAATGATCTATCTGAGCCAATTAGCAATGTAGACCTTGTTGTCACGGTTGGTGGTGATGGCACCCTTTTGCAGGCCAGCCATTTATTGGACGAGTCAATTCCTATTCTTGGAGTAAATTCTGATCCGACACAGGTGGATGAGGTAGAAGAGTATGGCAATCAGTTTGATGCTTCTAGAAGCACAGGGCATCTTTGTGCGGCCACTGTTAATAACTTTGAGCAAGTATTAGATAGTGTCCTCAGTGGTGTAGCATCCCCTTCCAAGTTGTCAAGGCTATCCATATCTGTAAATTCAGAGTTGCTCACAAAGTATCCTCTCAATGACATATTAATTGCTCATCCATGTCCCGCATCGGTCTCTCGATTCTCGTTCAAAATTAGGAATGAGCAGCCATGTTCGCCCTTGTTGAACTGTCGATCGAGTGGTCTAAGAATTTCGACTGCTGCTGGATCAACAGCTGCAATGCGATCAGCAGGTGGATTTCCCATGCCCATTCTATCTCGGGACCTTCAGTACATGGTACGAGAGCCCATGACCCCAGGAAAACTGTCCAATTTTATGCATGGGATGGTATTGTCAGATCAGTCGATGGAAATGGCCTGGTTGTGTAATGATGGTGTGATTTACATTGATGGTTCTCATGTTTGTCATCCTATTCAATACGGCGATGTCATTGAAATATCTTCCAAGGCCCCGAGTCTGAAAGTTTTCTTGCCTCATCTTCCAAGGCCCCGAGTCTGA 1113 46.45 FWKVELNPNPTRETSSKADRADLSIIRKFDADLCTVFMLCVRPVSQLSPSNPNFRCEKMAMRRLLLFLKPFDANPVLHSDGFSRVTSPQILRHLENRHAVHREAIKFCKDVLQQKPVDWEAVFRNDLSEPISNVDLVVTVGGDGTLLQASHLLDESIPILGVNSDPTQVDEVEEYGNQFDASRSTGHLCAATVNNFEQVLDSVLSGVASPSKLSRLSISVNSELLTKYPLNDILIAHPCPASVSRFSFKIRNEQPCSPLLNCRSSGLRISTAAGSTAAMRSAGGFPMPILSRDLQYMVREPMTPGKLSNFMHGMVLSDQSMEMAWLCNDGVIYIDGSHVCHPIQYGDVIEISSKAPSLKVFLPHLPRPRV 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3424361 3429187 + Cp4.1LG01g00770.1 Cpe01g00593 461906

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00593 370 PANTHER NAD KINASE 61 364 - -
Cpe01g00593 370 Pfam ATP-NAD kinase N-terminal domain 84 163 IPR002504 GO:0003951|GO:0006741
Cpe01g00593 370 Gene3D - 98 223 IPR017438 -
Cpe01g00593 370 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 114 360 IPR016064 -
Cpe01g00593 370 Gene3D - 224 354 IPR017437 GO:0003951|GO:0019674
Cpe01g00593 370 PANTHER NADH KINASE 61 364 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00593 K00858 ppnK, NADK; NAD+ kinase [EC:2.7.1.23] - csv:101209512 536.569
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g30 . . . . . . Bma10g00463 . . Cmo04g00705 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bda05g00813 . . . . . . . . Cma04g00656 . . . . Cpe01g00593 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010160 1 2 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 2 1 32
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe01g00593 Cpe_Chr01 FPKM 32.500603 29.579212 8.941582 9.950119 25.848228 17.279444 22.708811 0.171861 0.072824 0.076726