Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe01g00667 | ATGAAAACTACTTCCGAGCACTCTTCATTTACACCAGGCAATCCATCTTCGTCCTTGTCCTCGTCCTCGTCCTCGTCCTCGTTCTCCTCATGGTCGTCGTCGTCGTTTTCCTCTTCCTTCTCACCGCCATCACCATCGTTTCCTGATTTCAACCCCGATAGCTCTACACCATCAGATGATAATAACTCCGATTATAATGAATCTCCAGCACCAAAGTCATCAAAGGACTCTAAGGATAGAAAATCGGGTAAATCTTCAAAAGCGCCAAGCCCGCGGTCATCGACGCCGATTGCTTCAAAATCTCCTTCACCGCGATCTTCATCATCTTCAAAAGATGCATTGACCTCGGGAGATCGGACGGAGGGGAAATCATCACACAAATCATCATCACACAAATCATCCAACAATGATGATTCAGGGTCGTCGGATGTGAGCCCAGGAGTCATAATTGGGGTGGCGGTTGGGGTGGGATTGTTCATAATTCTTCTCATATCATTAATTGCTCTGTGCTCCAAGAAGAGGAAGAGGAAGGAAGATCCTATGTCGTACTATAGTGGAGACAATGCGAATGGACCTAAAGGTGGTAACTATTACAACGGTTCACAAAAACCAAATTGGCACAACAACAACGCAGGGGGGGGTCCGGGCGTGAATGGGTGGCCGCCCATGAGTAGTGAGAACATGACCACAAGCGGTAGTTTTGCAGGGCCTCCTCTGCCTCCACCATCGCCATCCCTTGCGTTCGGGTTCAGCAAGAGCACGTTCACGTACGACGAGCTTGCAGCAGCAACAGGAGGGTTCGCGCACGGCAACCTACTTGGGCAGGGGGGGTTCGGATACGTGCACAAGGGGGTGTTGCCCAACGGGAAAGAGGTGGCGGTGAAGAGCCTCAAGGTGGGAAGCGGGCAGGGGGAGAGAGAGTTCATGGCTGAGGTTGAGATTATTAGTAGAGTCCACCATCGCCATTTGGTGTCCTTGGTTGGCTTTTGCATTGCCGGTGGACAGAGAATGTTGGTCTATGAGTTTGTTCCTAACAACACCTTGGAGCATCACCTTCATGTTAAAGACCTCCCTGTAATGGATTGGCCAACCAGGCTTCGTATTGCCATAGGTTCTGCCAAGGGTCTTGCTTACCTTCACGAAGATTGTCATCCAAAAATTATTCATCGAGATATCAAGTCCGCTAATATTCTAATTGATGCCAATTTCGAAGCAATGGTGGCCGATTTTGGATTGGCTAAGTTGTCTTCAGATACTAACACCCATGTCTCCACCAGGGTTATGGGTACATTTGGGTATTTAGCACCCGAATATGCATCAAGCGGGAAGCTAACAGAGAAGTCTGACGTGTTCTCATTTGGTGTAATGTTATTGGAACTCATTACTGGAAAACGACCGGTTGATCCTCATCATGTTATGGAGGATAGCTTAGTAGACTGGGCACGAGCGATTATTAGCGGAGAAATGGGAGAAGATGTATACGAAGTGCTGGTGGATAAGCGATTAGGAAAGGAGTTCAATACTCAGGAGATGGGGCGCATGGTATCATGTGCTGCAGCCTCCATCCGTCACTCCGCTAGAAAACGCCCCAAAATGAGCCAAGTAGTACGAGCCCTCGAAGGGGATTATTCATTGGACGACCTAAACGACGGGATAAGACCAGGTCAAAGCTCAATTTATAGTGTGGCAGGGTCGGACTATGATTCAAATGCGTACCAAGCCGACATGTCAAGATTCAGGAAACTAGCTTTGTCAGACGACAGCAGTGAGCTCGCAACTTCTAGCAATGACTCACGAGAGATCAACCATCCCGGGACCCAAAGGCCTCTCTTTTGA | 1836 | 48.69 | MKTTSEHSSFTPGNPSSSLSSSSSSSSFSSWSSSSFSSSFSPPSPSFPDFNPDSSTPSDDNNSDYNESPAPKSSKDSKDRKSGKSSKAPSPRSSTPIASKSPSPRSSSSSKDALTSGDRTEGKSSHKSSSHKSSNNDDSGSSDVSPGVIIGVAVGVGLFIILLISLIALCSKKRKRKEDPMSYYSGDNANGPKGGNYYNGSQKPNWHNNNAGGGPGVNGWPPMSSENMTTSGSFAGPPLPPPSPSLAFGFSKSTFTYDELAAATGGFAHGNLLGQGGFGYVHKGVLPNGKEVAVKSLKVGSGQGEREFMAEVEIISRVHHRHLVSLVGFCIAGGQRMLVYEFVPNNTLEHHLHVKDLPVMDWPTRLRIAIGSAKGLAYLHEDCHPKIIHRDIKSANILIDANFEAMVADFGLAKLSSDTNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGKRPVDPHHVMEDSLVDWARAIISGEMGEDVYEVLVDKRLGKEFNTQEMGRMVSCAAASIRHSARKRPKMSQVVRALEGDYSLDDLNDGIRPGQSSIYSVAGSDYDSNAYQADMSRFRKLALSDDSSELATSSNDSREINHPGTQRPLF | 611 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 3898590 | 3901300 | - | Cp4.1LG01g06880.1 | Cpe01g00667 | 461980 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe01g00667 | 611 | ProSitePatterns | Protein kinases ATP-binding region signature. | 273 | 295 | IPR017441 | GO:0005524 | |
Cpe01g00667 | 611 | CDD | STKc_IRAK | 273 | 541 | - | - | |
Cpe01g00667 | 611 | ProSiteProfiles | Protein kinase domain profile. | 267 | 545 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe01g00667 | 611 | MobiDBLite | consensus disorder prediction | 192 | 212 | - | - | |
Cpe01g00667 | 611 | SUPERFAMILY | Protein kinase-like (PK-like) | 240 | 539 | IPR011009 | - | |
Cpe01g00667 | 611 | Gene3D | Transferase(Phosphotransferase) domain 1 | 343 | 549 | - | - | |
Cpe01g00667 | 611 | MobiDBLite | consensus disorder prediction | 116 | 133 | - | - | |
Cpe01g00667 | 611 | MobiDBLite | consensus disorder prediction | 590 | 611 | - | - | |
Cpe01g00667 | 611 | Pfam | Protein tyrosine and serine/threonine kinase | 270 | 539 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe01g00667 | 611 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 20 | 591 | - | - | |
Cpe01g00667 | 611 | MobiDBLite | consensus disorder prediction | 177 | 237 | - | - | |
Cpe01g00667 | 611 | MobiDBLite | consensus disorder prediction | 71 | 86 | - | - | |
Cpe01g00667 | 611 | MobiDBLite | consensus disorder prediction | 1 | 144 | - | - | |
Cpe01g00667 | 611 | Gene3D | Phosphorylase Kinase; domain 1 | 244 | 342 | - | - | |
Cpe01g00667 | 611 | MobiDBLite | consensus disorder prediction | 87 | 115 | - | - | |
Cpe01g00667 | 611 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 20 | 591 | - | - | |
Cpe01g00667 | 611 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 387 | 399 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe01g00667 | 611 | MobiDBLite | consensus disorder prediction | 51 | 70 | - | - | |
Cpe01g00667 | 611 | SMART | serkin_6 | 267 | 544 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe01g00667 | 611 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g00667 | Cpe-Chr1:3898590 | Cpe04g01128 | Cpe-Chr4:9750604 | 3.53E-151 | dispersed | |
Cpe01g01532 | Cpe-Chr1:9173119 | Cpe01g00667 | Cpe-Chr1:3898590 | 1.29E-46 | dispersed | |
Cpe16g00317 | Cpe-Chr16:5039746 | Cpe01g00667 | Cpe-Chr1:3898590 | 2.43E-64 | dispersed | |
Cpe18g00431 | Cpe-Chr18:5399968 | Cpe01g00667 | Cpe-Chr1:3898590 | 2.20E-158 | dispersed | |
Cpe18g00604 | Cpe-Chr18:6386088 | Cpe01g00667 | Cpe-Chr1:3898590 | 1.97E-70 | dispersed | |
Cpe01g00667 | Cpe-Chr1:3898590 | Cpe05g01252 | Cpe-Chr5:8763463 | 1.02E-170 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62123 | PF07714 | PK_Tyr_Ser-Thr | 3.60E-47 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe01g00667 | - | - | cmos:111447691 | 971.844 |