Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00671 ATGAGAGTTCCTGTTTCCAATCACCAATTGCCCTCTTCTTCTCCAAATCCTAAACTCAATTCCTCTCCCTCCGCCATCGCCATCGCTACCCCCACTCCCACCCCCACCTCCACCCCCAATATTACCAACCCCTGTTACGAACCCACCTCCGTCCTCGACCTCCGCCGCAGCCCCAGCCCTGTGGCGCCTGACCCACACACCCTCTCCTCCGCTCCACTCCTCCCCTCTGACGATCGTCCCAACGTCAACAACAACAACAACAACAACAACAACAACAACCCTTCTCTGGACTGGGATGAACAGGCCCTCCACAACCTCGACTGGGACTCCATCATGGGAGATTTGGGCTTACACGATGACTCCAACTCTGCTCCCAAAAACCCAAACCCAAACCCCAATCCCAATCCCAATCCCAATCCCAACAACAATAATCATGTTCCTCAATTCCCTGATTTCCTCCACTCCCACCCCTTCGATCATCAAACCCATCTGGTTTCCCCTGATTTCTTCCTCTCTGAACCCCCCTATTCCAACCACACCCCCACCTTCAATTCCTTCGATTTGGCCGCTCCCAATTCCAACAACTCCTCCTGCGAATTCCTTGAAGACATAGTCCGCACCGCTGATTGTTTCGATTCCAATGACTTCCAACTCGCCCAAGTCATATTGGAGCGCCTCAATCAACGCCTTCAATCCTCCACCGGAAAGCCCCTTCAGCGGGCCGCCTTCTTCTTCAAAGAGGCTCTTCAATCTCTCCTCTCCGCCTCCAACCGCCACAATCGCCTCTCCTCCTGGCCCGAAATTGTTCATACAATCAGGGCTTACAAGGTCTTCTCTGCAATTTCTCCAATTCCCATGTTCTCCCACTTCACTACCAATCAGGCGCTTCTTGAAGCTCTTAACGGTTCGTCTTTCATTCATATTGTTGATTTTGATATTGGGTTTGGAGGGCAGTACGCGTCTTTCATGAAGGAGATTGCAGAGAAGGCAGAGTCCAGGAAGATGATTCCGCCGGTGCTTCGGATAACGGCGGTGGTGCCGGAGGAATTTGCGATTGAGAGTAGGTTGATTAGGGAGAATCTGTGTCAGTTCGCTCAGGATCTGAAGATTCGGTTTCATATAGATCTGGTGCCGCTTCGGACCTTCGAGACGTTGTCGTTCAAATCGGTCAAGTTCATGGAAGGGGAGAAGGCCGCGATTTTATTAACGCCCGCGATCTTCCGCCGTCTTGGGAGTATAAACAGTATAGGGTCTTTTCTCTCCGACGTGCGACGGGTGTCGCCCTGCGTCGTCGTGTTCGTTGACGGTGAAGGATGGTCGGACTCCGGCGCGGCGTCGTTCAAGAGGAATTTGGTAGATAGCCTGGAGTTCTACGCCATGATGCTAGAGTCGCTGGACGCAGCGGTGGCTGGCGGGGACTGGGTGCGGAGGATAGAGACGTTTGTGTTCCGGCCGAAGATATTGGCTGCGGTGGAAGGAGCAGGGAGAATGGCAGCGCCGCCGTGGAGGGAGGTATTCCACGGCGCCGGGATGAGGCCAGTGGCGCTGAGCCAGTTTGCAGATTTTCAGGCGGAGTGCTTACTTGGAAAAGTACAGGTTCAAGGGTTCCAAGTAGGAAAACGGCATGCTGAGCTGGTGCTGTGCTGGCACGAGAGGCCTCTGGTTGCCACGTCGGCGTGGAGGTGTTAA 1689 53.94 MRVPVSNHQLPSSSPNPKLNSSPSAIAIATPTPTPTSTPNITNPCYEPTSVLDLRRSPSPVAPDPHTLSSAPLLPSDDRPNVNNNNNNNNNNNPSLDWDEQALHNLDWDSIMGDLGLHDDSNSAPKNPNPNPNPNPNPNPNNNNHVPQFPDFLHSHPFDHQTHLVSPDFFLSEPPYSNHTPTFNSFDLAAPNSNNSSCEFLEDIVRTADCFDSNDFQLAQVILERLNQRLQSSTGKPLQRAAFFFKEALQSLLSASNRHNRLSSWPEIVHTIRAYKVFSAISPIPMFSHFTTNQALLEALNGSSFIHIVDFDIGFGGQYASFMKEIAEKAESRKMIPPVLRITAVVPEEFAIESRLIRENLCQFAQDLKIRFHIDLVPLRTFETLSFKSVKFMEGEKAAILLTPAIFRRLGSINSIGSFLSDVRRVSPCVVVFVDGEGWSDSGAASFKRNLVDSLEFYAMMLESLDAAVAGGDWVRRIETFVFRPKILAAVEGAGRMAAPPWREVFHGAGMRPVALSQFADFQAECLLGKVQVQGFQVGKRHAELVLCWHERPLVATSAWRC 562
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3925065 3926753 + Cp4.1LG01g06920.1 Cpe01g00671 461984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00671 562 MobiDBLite consensus disorder prediction 114 157 - -
Cpe01g00671 562 MobiDBLite consensus disorder prediction 1 47 - -
Cpe01g00671 562 Pfam GRAS domain family 203 561 IPR005202 -
Cpe01g00671 562 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 16 561 IPR005202 -
Cpe01g00671 562 MobiDBLite consensus disorder prediction 74 98 - -
Cpe01g00671 562 PANTHER SCARECROW-LIKE PROTEIN 15 16 561 - -
Cpe01g00671 562 MobiDBLite consensus disorder prediction 127 143 - -
Cpe01g00671 562 MobiDBLite consensus disorder prediction 1 98 - -
Cpe01g00671 562 ProSiteProfiles GRAS family profile. 191 561 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00671 Cpe-Chr1:3925065 Cpe08g00744 Cpe-Chr8:5898341 2.38E-71 dispersed
Cpe01g00671 Cpe-Chr1:3925065 Cpe14g00553 Cpe-Chr14:3510614 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
48775 PF03514 GRAS 5.60E-90 CL0063 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00671 - - cpep:111811752 1038.48