Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00711 ATGGCGTATATGTGCGCGGACAGTGGCAATCTAATGGCAATTGCCCAACAAGTCATCAAGCAGAAACAACAGCAGGAGCAGCAGCAGCAACAGCAGCAGCAGCAGCTTTGTCCGCTTACCCCCTTTTCGCTTCTTCCTTGGACTACTACCAATTCTTCTCCAACAATGGCTTCTTCTTCTTCTTCTTCTCCTAATTTATCCTTTGGGGTTTCTGGTTCTGCATTCGCTGACCCCTTCCAGGTCGCCGGAGATGCGGATTCTGCTGAGCCGGCTTTTCATTTTCCCAATTTGGAGCATCCATCTGCTGGGTTTAGGTTCTTCCCTAACTTCGGCGGTGGGGAGTTCGACTCTGATGACTGGATGGATAGTTTGGTCGGCGGTGGAGATTCGACGGATAGCTCTACTCTGCCGTCTGGTTGTGATGCTTATGCCGAGTATGGTCTCTTTGGTGTGGATCTCTTTAATGGCTCTCCGAGTAGACTCGTTGTCGCTTGCTCTCCGCCGTCTGATTTTAACCGAGCTGTTCTACCGGAAAGTTCGTGCAACACGAGTACCGTTCCGCCGCCGCCGTGGAGTTCTCCTCCACCATCAGTAAAGGATGCTGGAGTAGCCAATCCACCGGCGGAGAAGTTGCAGACGAACGACGTTGTAGAAGCCTCGTCGAGCGCGCCTGAAGAGGTGTTGCCGTTGCCGTCGCCGCCACCGCCGCTTCTTAAAGTCTTGCTGGATTGTGCGCGGCTCTGTGATTCTGAGCCCGACAGAGCCGTAAAAACTCTCGATCGGATTGGTAAATCGTTGCTAGAACAAGGAGATCCGATTGAGCGAGTGGCGTTTTACTTCGGCGAAGCTCTTCGGAACAGATTATCCCCGGCGGCGAGGAACAATTTCTTGGATTCAATTGAGACCGATGCTAATTCCGAAGATTTCTTGCTCTCGTACAAAGCTCTGAACGACGCTTGTCCTTACTCCAAGTTCGCGCATCTCACGGCGAACCAAGCAATTCTGGAAGCTACACAGAGAGCCAGTAAAATTCACATTGTCGACTTCGGAATCGTTCAGGGCGTTCAATGGGCGGCGCTTCTGCAAGCTTTGACCACGCGAGCCACCGGAAAGCCTATCAAAGTTCGTATCTCCGGAATACCTGCACCATCGCTCGGGGAGTCTCCAGCGGCATCGCTGTACGCCACCGGCAATAGACTCTCTGAGTTCGCAAAGCTTCTGGAACTGAATTTCGAGTTCGAACCGATTCTAACGCCGATTGAGAATCTGAACAAATCGAGCTTCAGCATCCAATCGGACGAGGTATTGGCAGTGAATTTCATGCTTCAATTGTACGGTCTCCTCGACGAGGTTCCGGTTGGTGTTCATAATGCTCTCCGATTAGCGAAATCTCTAAGCCCTAAAATTGTGACTCTCGGCGAGTACGAGGCGAGTTTGAACCGGACTGGATTCTACAATCGCTTCAAAAACGCATTGAAATACTACTCCGCCATTTTCGAATCGCTAGAGCCAAACCTGCCTCGAGACTCGCCGGAAAGGCTCCAATTAGAGAAACTGTTGATCGGTCGTCGAATTGCCGGCGTGATTGGAACGGAAGAAGAATCAGGAAGCAAGAGAAGAGTACGCATGGAAGACAAAGAAGAATGGAAGAATTTGATGGAGAGCTCCGGATTCGAACCTGTAGCACTCAGCCATTACGCCATTAGTCAGGCCAAAATACTTCTATGGAACTACAATTACAATTCTCTCTACTCTCTGATCGAATCGGCACCGGAATTTCTTTCTCTCGCATGGAACGACGTACCTCTCTTAACTGTATCTTCCTGGCGTTGA 1833 50.57 MAYMCADSGNLMAIAQQVIKQKQQQEQQQQQQQQQLCPLTPFSLLPWTTTNSSPTMASSSSSSPNLSFGVSGSAFADPFQVAGDADSAEPAFHFPNLEHPSAGFRFFPNFGGGEFDSDDWMDSLVGGGDSTDSSTLPSGCDAYAEYGLFGVDLFNGSPSRLVVACSPPSDFNRAVLPESSCNTSTVPPPPWSSPPPSVKDAGVANPPAEKLQTNDVVEASSSAPEEVLPLPSPPPPLLKVLLDCARLCDSEPDRAVKTLDRIGKSLLEQGDPIERVAFYFGEALRNRLSPAARNNFLDSIETDANSEDFLLSYKALNDACPYSKFAHLTANQAILEATQRASKIHIVDFGIVQGVQWAALLQALTTRATGKPIKVRISGIPAPSLGESPAASLYATGNRLSEFAKLLELNFEFEPILTPIENLNKSSFSIQSDEVLAVNFMLQLYGLLDEVPVGVHNALRLAKSLSPKIVTLGEYEASLNRTGFYNRFKNALKYYSAIFESLEPNLPRDSPERLQLEKLLIGRRIAGVIGTEEESGSKRRVRMEDKEEWKNLMESSGFEPVALSHYAISQAKILLWNYNYNSLYSLIESAPEFLSLAWNDVPLLTVSSWR 610
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4141245 4143077 + Cp4.1LG01g09550.1 Cpe01g00711 462024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00711 610 ProSiteProfiles GRAS family profile. 228 610 IPR005202 -
Cpe01g00711 610 Coils Coil 12 35 - -
Cpe01g00711 610 Pfam GRAS domain family 238 610 IPR005202 -
Cpe01g00711 610 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 238 609 - -
Cpe01g00711 610 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 238 609 IPR005202 -
Cpe01g00711 610 MobiDBLite consensus disorder prediction 179 210 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00711 Cpe-Chr1:4141245 Cpe01g02589 Cpe-Chr1:21009953 2.91E-60 dispersed
Cpe01g00711 Cpe-Chr1:4141245 Cpe10g00605 Cpe-Chr10:3534018 0 wgd
Cpe01g00711 Cpe-Chr1:4141245 Cpe14g00561 Cpe-Chr14:3562009 0 wgd
Cpe01g00711 Cpe-Chr1:4141245 Cpe19g00807 Cpe-Chr19:6062922 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
48783 PF03514 GRAS 1.40E-106 CL0063 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00711 - - cmax:111479082 1069.68