Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00719 ATGAAGGAGCGGCTGAATTGGGTTTTGGGCTTGCTTTTGTTCATCTCTCTTGGCAAATTCTGTGCAAATGTCTCTGCTACTGTAGAAGCTACTGCACTTCATGTATTTCGATCCAATTTGGAAGATCCAAACAATGTTCTGCAGAGTTGGGATCCCACCCTTGTGAACCCCTGCACTTGGTTTCATGTCACTTGCAACAATGAAAATAACATCATAAGAGTTGACCTTGGAAATGCTGGATTGTCTGGTAGATTAGTTCCGCAGCTTGGTCAACTTAAAAGCCTTCAATACTTGGAGCTTTATGGCAACAACATAAGTGGAGACATTCCATTTGATCTTGGGAATCTGGAAAACTTGGTGAGCCTAGACCTATACTTGAACGCGTTAACTGGTCCGATTCCCGACACGTTTGGCAAGCTCACACAATTGCGTTTCCTTCGGCTAAATGACAACAAACTATCGGGATCGATACCGATGTCCTTGACTAATATTTCCACTCTGCAAGTCTTGGATCTATCGAACAACCTTTTATCTGGAAGGGTTCCAAATAATGGCTCATTTTCACTCTTTACTCCCATTAGTTTTGCAACTAATTTGAATCTATGTGGTCTGGTTACCGGGAAGCCCTGCCCCGGGGATCCTCCTTTTTCTCCTCCGCCACCATTTGTTCCACAGTCGACGTTTTCTTCCTATGAGGTAAACAATCCCAATGGAGCAATTGTTGGAGGAGTGGCCGCTGGTGCTGCTTTACTTTTTGCAACTCCAGCTATCATATTCGTCTATTGGCATCGACGGAGATCACGAGAGATATTCTTTGATGTTCCTGCGGAAGAAGATTCAGAGCTCAACTTGGGGCAGCTGAAAAGATTTTCACTGAGAGACTTACAAGTTGCCACAGATAACTTCAGCAACAAAAATATTCTTGGTCGAGGTGGATTCGGTAAAGTTTACAGGGGACGCCTGGCTGATGGCTCGTTAGTAGCAGTAAAACGGCTCAAAGAAGAGCGTACTCCGGGTGGAGAGTTACAGTTCCAAACAGAAGTAGAGATGATTAGCATGGCCGTGCATCGAAATCTCTTGCGACTACATGGATTTTGTACAACGACAACCGAACGCCTCCTTGTTTATCCTTATATGGCTAACGGAAGTGTTGCATCATGCTTAAGAGAACGTCCACAATCCGAAGCTCCTCTTGACTGGCCAACTCGAAAGAAAGTTGCATTAGGCTCTGCAAGGGGTCTTTCTTACTTACACGATGGATGCGATCCGAAAATCATCCATCGTGACGTGAAAGCTGCGAACATTTTACTGGATGAGGAGTTCGAGGCTGTCGTCGGTGATTTCGGTCTCGCAAAGCTGATGGACTACAAGGACACTCATGTTACAACAGCAGTAAGAGGTACTATTGGACATATAGCTCCGGAGTATCTCTCAACTGGGAAGTCATCTGAAAAGACTGATGTTTTTGGTTATGGCATTATGCTGTTGGAGCTCATAACCGGGCAGAGGGCGTTCGATCTTGCTCGACTTGCGAACGATGAAGATGTTATGCTGCTTGATTGGGTAAAAGGCCTTCTGAAAGAGAAAAAGTTGAAGATGTTGGTTGATCCTGATCTGAGGGACAATTATGATGAATTAGAAGTTGAGCAAATCATCCAAGTAGCACTTCTCTGCACACAGAGCTCACCCATGGAACGACCAAAAATGTGTGAGGTGGTCAGAATGCTTGAAGGTGATGGCTTAACGGAGCGATGGGAGGAATGGCAGCGAGTCGAGGTAGTCTACCACGAAACCGAATTGGCATCTTCTCAAACTTCTGAATGGATGGTCGATTCAACCGAAAATGTTCGTGCTTTCGAATTATCAGGTCCTAGGTAA 1878 44.99 MKERLNWVLGLLLFISLGKFCANVSATVEATALHVFRSNLEDPNNVLQSWDPTLVNPCTWFHVTCNNENNIIRVDLGNAGLSGRLVPQLGQLKSLQYLELYGNNISGDIPFDLGNLENLVSLDLYLNALTGPIPDTFGKLTQLRFLRLNDNKLSGSIPMSLTNISTLQVLDLSNNLLSGRVPNNGSFSLFTPISFATNLNLCGLVTGKPCPGDPPFSPPPPFVPQSTFSSYEVNNPNGAIVGGVAAGAALLFATPAIIFVYWHRRRSREIFFDVPAEEDSELNLGQLKRFSLRDLQVATDNFSNKNILGRGGFGKVYRGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLHGFCTTTTERLLVYPYMANGSVASCLRERPQSEAPLDWPTRKKVALGSARGLSYLHDGCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDEDVMLLDWVKGLLKEKKLKMLVDPDLRDNYDELEVEQIIQVALLCTQSSPMERPKMCEVVRMLEGDGLTERWEEWQRVEVVYHETELASSQTSEWMVDSTENVRAFELSGPR 625
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4184686 4187938 + Cp4.1LG01g09570.1 Cpe01g00719 462032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00719 625 Gene3D Ribonuclease Inhibitor 26 212 IPR032675 -
Cpe01g00719 625 ProSiteProfiles Protein kinase domain profile. 302 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g00719 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Cpe01g00719 625 PANTHER - 14 625 - -
Cpe01g00719 625 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Cpe01g00719 625 SMART serkin_6 302 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g00719 625 Pfam Protein kinase domain 303 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g00719 625 Gene3D Phosphorylase Kinase; domain 1 271 378 - -
Cpe01g00719 625 SUPERFAMILY L domain-like 29 193 - -
Cpe01g00719 625 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Cpe01g00719 625 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 14 625 - -
Cpe01g00719 625 Pfam Leucine rich repeat 94 153 IPR001611 GO:0005515
Cpe01g00719 625 Gene3D Transferase(Phosphotransferase) domain 1 379 596 - -
Cpe01g00719 625 SUPERFAMILY Protein kinase-like (PK-like) 282 577 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00719 Cpe-Chr1:4184686 Cpe14g00602 Cpe-Chr14:3825757 0 dispersed
Cpe14g00863 Cpe-Chr14:7130495 Cpe01g00719 Cpe-Chr1:4184686 2.40E-23 dispersed
Cpe01g00719 Cpe-Chr1:4184686 Cpe09g00254 Cpe-Chr9:1462093 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62126 PF00069 Pkinase 1.10E-43 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00719 K13418 - csin:114301400 962.985