Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00738 ATGATGGTGGAGTTCCATGGAGAAATCCCAGAAGACTCTCACGATGGAGACGAAGAACAGGAAGAGGAAATTAGCTACGATGATCTTAAGAAACGAATGTGGAAAGACAGACAGAGGTTGAAGAAGATGAAGGAGAATCGTGATCATGAAGAGTTTGAATGGGCGGCCAGAGAAGAAGCTTCTCGCCGGAAGAAAATGTCCAGAGCTCAAGATTCGATTCTCAAGTACATGGATAAGATAATGGAGTCTTGTAAGGCACAAGGGTTTGTTTATGGGATCGTGCCGGAAAAGGGTAAACCGATCACCGGCTCTTCCGAGAGCCTCCGTGAGTGGTGGCAGGACAAGGTTCGGTTCGAACAGGATGCTCCACTGAACATCGCGAATTTCCTTCCGAGAGTGATCGAAGAAGCGGGGCTCGATCCCAAATCGTTTCTGCACCTACTCCAAGAATTGCAGGACACGACTTTAGGGTCGATTCTGTCGGCTCTGATGCAGCACTGTATTCCGCCGCAGAGGAAATTCCCGTTGGACAAGGGTCTGGCGCCGCCGTGGTGGCCGACGGGGAAGGAGCTTTGGTGGGGCGAACAAGGCGTCGCCGGTGGGCAGGGCGTTCCACCATATAAAAAGCCTCATGATCTCAAGAAGTCCTGGAAAATCAGTGTCCTTGCGGCGGTGATTAAACACATGTCTCTTGATCTGGACAACATGAGGAAATTGGTTCGACAATCGAAGAATTTACAGGCGAAAATGACGGCGAAAGAGACGATTACTTGGACTAAAGTCGTGAATCAAGAAGAAGCTCTCTTGCAATTGACCAAAAACAGCCTCAAAATAACATCCGACGAAGAAGATCAAGAACAACACGACCAAAACAGAGGACACGAAAACAGGGCAGAACAAGGCACCGGCGGGATTATTACGAAACGGAAGTGCGAATTCGAACGAGAAGCCACAGCTAATTCAGCGGTGTATGCTTGCCAGAACGAATGGTGCCCACAGAGCGAGGCGCCAAAGGGGTTCGCCGACAAGAACACGAGAACAGAGCACGAGACGCAGTGCGTTTACAGAGCCGACGGCATGGGTCAATTTTCTAACGAGCAGTCGATCGACACGCATTTGATGAGCGTGGTGGAGTGGATGAACTGGGAGCTGTCGAGGGCAGAGCCGAGCAGCAGCGAGTCGAGGATCGACGACGGCGGATATGGGTCGGGTAGCAGCACAGTGGATGGCAGTGGGTATTGGAAGGGCAGCATCGGAGAGGTAGGGGTGGATGGGTCGGGTAGCAGCACGGTGGAGGATTATGGCAGTGGGTATTGGAAGGGCGGGATTGGAGAGGCAACGGTGGATGGGTCGGGTAGCAGCACGGTGGATGATTATGGGAGTGGGTTTTGGAAGGGCGGCATCGGAGAGGCAGCAGTGGACGAGGCGTTTGAGATGCATAGAGAGAGTATGGATTTGAATGCGAGTCCGGCGGACGATTTGCAATGCCAACAAGATGCAACTTCGATTTGGGATTTGAGATATGAATGGAGTGAAGAATAA 1542 51.69 MMVEFHGEIPEDSHDGDEEQEEEISYDDLKKRMWKDRQRLKKMKENRDHEEFEWAAREEASRRKKMSRAQDSILKYMDKIMESCKAQGFVYGIVPEKGKPITGSSESLREWWQDKVRFEQDAPLNIANFLPRVIEEAGLDPKSFLHLLQELQDTTLGSILSALMQHCIPPQRKFPLDKGLAPPWWPTGKELWWGEQGVAGGQGVPPYKKPHDLKKSWKISVLAAVIKHMSLDLDNMRKLVRQSKNLQAKMTAKETITWTKVVNQEEALLQLTKNSLKITSDEEDQEQHDQNRGHENRAEQGTGGIITKRKCEFEREATANSAVYACQNEWCPQSEAPKGFADKNTRTEHETQCVYRADGMGQFSNEQSIDTHLMSVVEWMNWELSRAEPSSSESRIDDGGYGSGSSTVDGSGYWKGSIGEVGVDGSGSSTVEDYGSGYWKGGIGEATVDGSGSSTVDDYGSGFWKGGIGEAAVDEAFEMHRESMDLNASPADDLQCQQDATSIWDLRYEWSEE 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4294084 4295625 - Cp4.1LG01g09350.1 Cpe01g00738 462051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00738 513 MobiDBLite consensus disorder prediction 279 296 - -
Cpe01g00738 513 Pfam Ethylene insensitive 3 27 266 IPR006957 GO:0005634
Cpe01g00738 513 MobiDBLite consensus disorder prediction 1 25 - -
Cpe01g00738 513 PANTHER ETHYLENE INSENSITIVE 3-LIKE 5 PROTEIN 13 509 - -
Cpe01g00738 513 Gene3D - 138 276 IPR023278 GO:0003700|GO:0005634
Cpe01g00738 513 Gene3D - 55 132 IPR023278 GO:0003700|GO:0005634
Cpe01g00738 513 Coils Coil 26 46 - -
Cpe01g00738 513 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 13 509 IPR006957 GO:0005634
Cpe01g00738 513 SUPERFAMILY DNA-binding domain of EIN3-like 145 269 IPR023278 GO:0003700|GO:0005634
Cpe01g00738 513 MobiDBLite consensus disorder prediction 279 303 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00738 Cpe-Chr1:4294084 Cpe04g00955 Cpe-Chr4:8670547 3.92E-37 dispersed
Cpe01g00738 Cpe-Chr1:4294084 Cpe14g00591 Cpe-Chr14:3773072 8.75E-56 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
48786 PF04873 EIN3 1.50E-106 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00738 K14514 - csv:116406095 673.7