Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00746 GGCTGTGATGCTTCTATGTTGCTGGATGATACGCCGACGATGCTTGGAGAGAAACTCTCTCTCTCGAACATTAATTCGCTTAGATCTTATGAAGTTGTTGATGAAGTGAAGGAGGCGTTGGAGAAGGCCTGTCCTGGAATCGTCTCGTGTGCAGATATCATTATCATGGCGTCTAGAGATGCCGTTGCTCTAGTAAGCGGCCCCAACTGGACAGTGAGATTAGGTAGGCTGGACAGCTTAACAGCAAGCCAAGAGGACTCAAACCAGATCATGCCAAGTCCAAGAGCCAATGCAAGCTCTCTCATTGACCTCTTCAACAAATACAACTTATCTGTTAAAGATCTGGTTTCTCTTTCAGGTTCCCACTCCATCGGCCAAGGCCGATGTTTCTCCATCATGTTTCGGCTCTACAATCAGTCAGGTACTGGGAGGCCAGACCCGGCCATTGAGCCGGGCTTCAGAGAAGAGCTCTTTAAGCAATGCCCTCAAGGTGGGGACGAAAATGTCACAATGAACCTTGACTCTACACCTTATATTTTTGACAATCAGTACTTCAAGGACTTGGTTGGTGGGAGAGGGTTCTTGAATTCTGATGAAACTCTCTACACATCTGCTGCAACTCGAAGGTATGTGAGGTACTTCAGCAAAAACCAAAGCGCGTTTTTTAACGCATTCGTGGAGGGTATGCTGAAGATGGGTGACTTGCAGTCTGGCCACCCGGGGGAGGTTAGAAGGAATTGTAGAGTAGTCAATGGCCAGTCTGTGATCATATAA 774 47.42 GCDASMLLDDTPTMLGEKLSLSNINSLRSYEVVDEVKEALEKACPGIVSCADIIIMASRDAVALVSGPNWTVRLGRLDSLTASQEDSNQIMPSPRANASSLIDLFNKYNLSVKDLVSLSGSHSIGQGRCFSIMFRLYNQSGTGRPDPAIEPGFREELFKQCPQGGDENVTMNLDSTPYIFDNQYFKDLVGGRGFLNSDETLYTSAATRRYVRYFSKNQSAFFNAFVEGMLKMGDLQSGHPGEVRRNCRVVNGQSVII 257
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4332017 4333737 + Cp4.1LG01g09270.1 Cpe01g00746 462059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00746 257 SUPERFAMILY Heme-dependent peroxidases 1 251 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cpe01g00746 257 Gene3D - 1 251 - -
Cpe01g00746 257 PANTHER PEROXIDASE 17 1 252 - -
Cpe01g00746 257 Gene3D Peroxidase, domain 2 92 232 - -
Cpe01g00746 257 PRINTS Plant peroxidase signature 113 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe01g00746 257 PRINTS Plant peroxidase signature 227 240 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe01g00746 257 PRINTS Plant peroxidase signature 28 41 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe01g00746 257 PRINTS Plant peroxidase signature 47 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe01g00746 257 PRINTS Plant peroxidase signature 66 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe01g00746 257 PRINTS Plant peroxidase signature 171 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe01g00746 257 PRINTS Plant peroxidase signature 187 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe01g00746 257 CDD secretory_peroxidase 1 250 IPR033905 GO:0004601|GO:0042744
Cpe01g00746 257 PRINTS Haem peroxidase superfamily signature 48 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe01g00746 257 PRINTS Haem peroxidase superfamily signature 114 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe01g00746 257 PRINTS Haem peroxidase superfamily signature 66 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe01g00746 257 PRINTS Haem peroxidase superfamily signature 173 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe01g00746 257 PANTHER PEROXIDASE 72-RELATED 1 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe01g00746 257 ProSiteProfiles Plant heme peroxidase family profile. 1 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe01g00746 257 Pfam Peroxidase 1 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe01g00746 257 ProSitePatterns Peroxidases proximal heme-ligand signature. 114 124 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00746 Cpe-Chr1:4332017 Cpe16g00679 Cpe-Chr16:7069904 4.60E-61 dispersed
Cpe01g00746 Cpe-Chr1:4332017 Cpe10g00426 Cpe-Chr10:2482905 2.65E-66 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00746 K00430 - csv:116406089 458.373