Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00763 ATGGATTTCGAGGATCACGAAGAAGAAGAAGAAGACATGGAAATGGAAGCTCCAACAAACTACGACAAACCACTTCTCCAAACCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCACTTTCCCGCCTCAACAAAACCCCATCTCCGCTCCACTCCAACCCCCCTCCTCCCCCCCTCTACAAAGAGTGCTTAAAAAACCACGCCGTCGCCATCGGTGGCCACTCCATCGACGGCTGCGGCGAGTTCATGCCCGCCGGCCCAAACGGCTCTCTCGACGCCCTCAAATGCGCCGCCTGCAACTGCCACCGCAACTTCCACCGCAAAGACATTACCACCAACGACGACAACGGAGAATCACCACCGTTCATCTTATCGAACCCACCACCAACCGCCCAGTTCGTTCCCTACTGGCGTGCTCCAGCTGGCTACCTCCACGTGGCACCCCAACGACGAATGCTGGCACTCCCATCGCCTTCAAGTGGAGACGGCGGATGCAGAAAGCGGGTAAGGACAAAATTCACGGAGGAGCAGAAGGAAAAGATGCTGGTGATGGCGGAGAAGCTGGATTGGCGCATTCAAAAGAACGATGAAGCGGCGGTGATGGAATTCTGCAACGAAATCGGGGTGAAACGCCGAGTGTTGAAGGTTTGGATGCATAACAACAAGAACACGTTTCGTAAGGAGTCTGAAAACAACAAATTCTCGTAA 705 54.75 MDFEDHEEEEEDMEMEAPTNYDKPLLQTPPPPPPPPPPLSRLNKTPSPLHSNPPPPPLYKECLKNHAVAIGGHSIDGCGEFMPAGPNGSLDALKCAACNCHRNFHRKDITTNDDNGESPPFILSNPPPTAQFVPYWRAPAGYLHVAPQRRMLALPSPSSGDGGCRKRVRTKFTEEQKEKMLVMAEKLDWRIQKNDEAAVMEFCNEIGVKRRVLKVWMHNNKNTFRKESENNKFS 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4457644 4458348 - Cp4.1LG01g09000.1 Cpe01g00763 462076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00763 234 Gene3D - 155 226 - -
Cpe01g00763 234 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 57 226 - -
Cpe01g00763 234 SUPERFAMILY Formin homology 2 domain (FH2 domain) 30 104 - -
Cpe01g00763 234 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 57 226 - -
Cpe01g00763 234 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 165 222 IPR006455 -
Cpe01g00763 234 MobiDBLite consensus disorder prediction 1 58 - -
Cpe01g00763 234 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 59 108 IPR006456 -
Cpe01g00763 234 MobiDBLite consensus disorder prediction 24 58 - -
Cpe01g00763 234 MobiDBLite consensus disorder prediction 1 16 - -
Cpe01g00763 234 Pfam ZF-HD protein dimerisation region 58 109 IPR006456 -
Cpe01g00763 234 SUPERFAMILY Homeodomain-like 156 226 IPR009057 -
Cpe01g00763 234 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 59 108 IPR006456 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00763 Cpe-Chr1:4457644 Cpe10g00542 Cpe-Chr10:3189658 1.09E-72 dispersed
Cpe07g00186 Cpe-Chr7:1166653 Cpe01g00763 Cpe-Chr1:4457644 7.07E-29 dispersed
Cpe01g00763 Cpe-Chr1:4457644 Cpe19g00746 Cpe-Chr19:5752708 1.19E-72 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
48787 PF04770 ZF-HD_dimer 1.40E-28 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00763 - - cpep:111809080 457.988