Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00785 TCATCACCAAACAAGAAGGTTGAACATAGTTTCAATACCTTTTTTTCTCAACACCATAAACTAATGGCTCCTGCGACTAACTGGCTTTCCTTTTCCCTCTCTCCCATTGAAATGCTTCGCTCTGCTGACTCTCAGTTTGTTCCTTATGAAACCTCCTCCACCGCCTCTCCTCACTATCTCTTGGACAACTTCTACTCCAATAATGGATGGAGTAATAGTACTAATGCTCACCCCAAATCATCATCCCAACTTTTCTTCATGGATGGAGATGAGAACAATGAGGTTATCAAAGAAGATCATCATAATCAATCGACACCCGCCATTTATACGAGCTATCTTCATCCACAAACCCACCACCAACCCAAACTGGAAGATTTCCTCGGCGATTCCTCGCCGATGGTGAGGTATTCCGACAGCCAGACGGAGACTCAAGATTCGTCTTTGACTCATATTTACGACCATGGCTCGGCACCCTATTTTGGGGACCAACAGGATCTCAAAACCATTGCGGCGTTTCGTGCTTTTTCTGGGAACTCCGGCTCTGAAGTGGACGATTCGGCTTCTATGGGGAGAACCCAGATCGCGGCCGGTGCTCATTCTATTGAGTCTTCGGTTAGAAATGAGTTGGGGACTTTCTCTAGCTGCCCCACGGGTGCTCTTTCCCTCGCCGTCGCGCAGAGCTCTGACACGGTGGCAGCTGGGGGTGTCGTGGCGGTTGACTCCGATTCGTCCAAGAAAATTGCCGACACTTTTGGCCAGCGAACATCAATTTACAGAGGAGTCACTAGGCACAGGTGGACGGGTAGATACGAGGCGCATCTATGGGATAACAGCTGTAGAAGAGAGGGTCAGGCTAGGAAAGGACGTCAAGAAGTTGCCAAATAA 885 48.7 SSPNKKVEHSFNTFFSQHHKLMAPATNWLSFSLSPIEMLRSADSQFVPYETSSTASPHYLLDNFYSNNGWSNSTNAHPKSSSQLFFMDGDENNEVIKEDHHNQSTPAIYTSYLHPQTHHQPKLEDFLGDSSPMVRYSDSQTETQDSSLTHIYDHGSAPYFGDQQDLKTIAAFRAFSGNSGSEVDDSASMGRTQIAAGAHSIESSVRNELGTFSSCPTGALSLAVAQSSDTVAAGGVVAVDSDSSKKIADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQEVAK 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4591876 4593352 - Cp4.1LG01g08880.1 Cpe01g00785 462098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00785 294 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL6 26 226 - -
Cpe01g00785 294 Gene3D AP2/ERF domain 257 291 IPR036955 GO:0003700|GO:0006355
Cpe01g00785 294 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 236 290 - -
Cpe01g00785 294 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 26 226 - -
Cpe01g00785 294 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL6 236 290 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00785 Cpe-Chr1:4591876 Cpe14g00643 Cpe-Chr14:4162762 4.74E-114 dispersed
Cpe01g00785 Cpe-Chr1:4591876 Cpe02g01743 Cpe-Chr2:14248478 4.51E-23 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00785 K09285 - csv:101217714 363.614