Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00793 ATGGCGATTACCAAGGTGAAAGAGCCAGTTTGTGTGACCGGAGCCAATGGGTTCATCGGATCTTGGGTCATCGGTACGCTGTTGGAAGCCGGTTACACTACCATTCATGCCTCGATCTTCCCCGGCTCCGATGCTTCCCATTTGATCAATCTCCAGGCCTCCGCTAACCCTAATGCTACCCTTCGGATTTTCGAAGTGAACGTAATGGACGGCGAGGCTGTGGCCAGGGCTGTGGAAGGCTGCAAGGGCGTATTCCACATTGCGTCACCCTGCACGCTGGAGGATCCTATTGATCCACAGAAAGAATTGGTGGAGCCGGCAGTGAAAGGCACTCTTAATGTTCTTGAGGCTGCGAAGAAACTTGGGGTACGGCGCGTTGTTCTTACTTCTTCTATTTCGGCTCTTGTTCCCAACCCTGGCTGGCCATCCGACAAGCCATTTGATGAATCGTCGTGGACAGACCTGGAGTACTGCAAATCGCGAAAGAAATGGTATCCAGTGTCAAAAACATTAGCAGAGAAAGCAGCATGGGAGTTTGAAGAGAAGCATGGAATGGATGTAGTTTCCATCCTGCCTGCCACATGTCTTGGTCCTCTTCTGCAACCAAATTTGAATGCAAGTTGTGCTGTGTTGCAGCAGTTGCTCCAAGGATCAAAGGACAGTCAGGAGTATCACTGGTTGGGCGCTGTGCATGTCAAAGATATTGCAAAAGCACAAGTATTGTTGTTCGAGTCTCCCACTGCTTCTGGTAGATATCTCTGCACCAATGGTATCTATCAATTTGCCGATTTTGCCGACGAAGTCTCGAAAATCTACCCTGAATTTCCTGTTCACAGATTTGTGGGAGAAACACAACCCCACTTGGTTGCCTGCAAAGATGCAGCCAAGAGGTTGATTGATCTGGGACTTATCTTCACCCCTCTTGAAGTTGCAATTCGAGATACGGTTGAGAGCCTTAGAAGCAAAGGTTTTCTGAAGCAGTGA 984 48.98 MAITKVKEPVCVTGANGFIGSWVIGTLLEAGYTTIHASIFPGSDASHLINLQASANPNATLRIFEVNVMDGEAVARAVEGCKGVFHIASPCTLEDPIDPQKELVEPAVKGTLNVLEAAKKLGVRRVVLTSSISALVPNPGWPSDKPFDESSWTDLEYCKSRKKWYPVSKTLAEKAAWEFEEKHGMDVVSILPATCLGPLLQPNLNASCAVLQQLLQGSKDSQEYHWLGAVHVKDIAKAQVLLFESPTASGRYLCTNGIYQFADFADEVSKIYPEFPVHRFVGETQPHLVACKDAAKRLIDLGLIFTPLEVAIRDTVESLRSKGFLKQ 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4677585 4680423 - Cp4.1LG01g08760.1 Cpe01g00793 462106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00793 327 CDD FR_SDR_e 10 303 - -
Cpe01g00793 327 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 9 313 - -
Cpe01g00793 327 Gene3D - 3 327 - -
Cpe01g00793 327 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 320 IPR036291 -
Cpe01g00793 327 Pfam NAD dependent epimerase/dehydratase family 10 248 IPR001509 -
Cpe01g00793 327 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 313 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00793 Cpe14g00711 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00793 Cpe-Chr1:4677585 Cpe20g00885 Cpe-Chr20:7916839 5.29E-110 dispersed
Cpe01g00793 Cpe-Chr1:4677585 Cpe12g00773 Cpe-Chr12:7020793 1.44E-69 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00793 - - cmo:103493282 587.8