Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00804 ATGGACGAGAGTTCAGAGAACGCCCGCGAAATTGATGGCTCTGAGAGGCAGGTGGAATCGCTGTTCTCACAGGATCGAGATTCTATATCGATGACGCTAGGGGAGCCACTATTGCGTTCCAGTACTGCTAGGATCAGCACCACCTCTCAGCTCGCCATTGTTGGTTCCAATATCTGTCCGATTGAGAGTCTTGACTATGAGGTATGGGAAAAGCGCTTCTCATGTGTATGGTTTGGTTCTGTTTTTATCTTTTGTGCTCAATTATCAGATGATCTTGTATGGTACTATCTGGCTTTTGCAGTATATGTGGGTTCCAATATTGTTTTAGCCTTTTCTGCTGCCGCACTCTGTGCCTATATTGCTCCTGCTGCTGCAGGTTCTGGCATACCTGAGGTGAAAGCATACCTCAATGGTATAGATGCTTATTCTATATTGGCTCCAAGTACCTTATTTGTGAAGATTTTTGGCTCTATATTTGCTGTTGCCGGTGGATTTGTTGTGGGTAAGGAAGGGCCCATGGTTCATACTGGTGCGTGCATTGCCTCATTACTGGGACAAGGAGGCTCTCGCAAATACCGCTTGACCTGGAAGTGGCTGAGATACTTCAAAAATGATAGGGACAGGCGGGATTTGATCACGTGTGGTGCAGCAGCTGGTGTGGCAGCTGCCTTTCGAGCTCCAGTTGGTGGCGTTCTCTTTGCACTTGAAGAAGCAGCTTCATGGTGGAGGAGTGCTCTTCTCTGGAGGACCTTTTTCACTACTGCTGTAGTAGCCGTTGTCTTGAGGGGTTTCATGGAATTTTGCCGAGGGGGGCAATGTGGGTTATTTGGTGAAGGAGGTCTCATCATGTTTAACATTCATACAGAAAACTCCACTTATGGCACTCCAGATCTTATTGCAATTGTTTTACTTGGAGTTATTGGTGGTGTGTTTGGAAGCCTTTACAACTACCTCGTGGATAAGGTCCTTCGAACCTACAGCATCATAAATGAGAGAGGTCCTGGATCGAAAGTCATTCTTGTTGTTAGCATTTCCCTTTTGACAACATGTATCTCATTTGGTCTTCCTTGGCTCTCACAATGTTTACCTTGCCCACCTAACTTGGAAGACGAATGCCCAACCGTTGGTCGCTCAGGAAACTACAAGAATTTCCAATGCCCGCCTGGCCAATATAATGATCTTGCATCGCTATTTTTCAATACCAATGATGATGTCATCCGCAACCTGTTCACATCTGCTACTGACAAGCAATTTCAGCTCTCCTCACTTTTCATCTTCTTTACTTCTATCTATTTTCTTGGCATTATTACTTATGGCATTGCCGTGCCCTCGGGGCTCTTCATTCCTGTAATACTGGCAGGGGCCTCTTATGGTCGCATTGTAGGGAGATTATTTGGTTCAGTTGCCACTCTTGATGTCAGTCTCTATGCCCTTCTCGGAGCTGCATCCTTCCTTGGTGGCACTATGAGAATGACTGTTTCTCTATGTGTCATACTCCTTGAGCTTACTAATAACCTTTTGATGCTCCCATTACTTATGTTGGTTCTTCTAATTTCAAAGTCAGTGGCAGATATTTTTAATAAAGGTGTCTATGATCAGATTGTGAAGATGAAGGGACTACCTTTTATGGAAGCCCATGCAGAACCATTTATGAGGCAATTGGTCGCTGGTGGTGTGGCTTCTGGTCCCTTAATTACGTTCTCTGGGATTGAGAAGGTCGATAACATTATGCATGCTTTGAAAATGACGAACCACAATGGGTTTCCTGTAATTGATGAGCCACCTTTCTCAGATAGTTCAGAGCTTTGTGGGCTTGTTTTGAGGTCTCATCTACTTGTTTTGCTTAAAGAGAAAAAATTTACAAAGAAAAAGACGTCAATTAGATCAGAAATTTTGAGGAGCTTCAAAGCATATGATTTTGCTAAACCTGGTTCTGGCAAAGGAGTGAAACTGGAAGATTTGGACATCAACGAGGAGGAGATGGAAATGTTTGTTGATCTTCATCCCATCACAAATACGTCGCCTTACACAGTGGTAGAAACAATGTCTCTGGCTAAAGCAGCGATTCTCTTTCACGCTCTTGGCTTGAGGCACTTACTGGTGGTTCCGAAGACACCCGGGAGGCCTCCTATTGCTGGAATTCTTACAAGGCACGATTTCATGCCGGAATATATTCTGGGACTTTACCCGTATCTCAACCCTCATTAG 2208 44.43 MDESSENAREIDGSERQVESLFSQDRDSISMTLGEPLLRSSTARISTTSQLAIVGSNICPIESLDYEVWEKRFSCVWFGSVFIFCAQLSDDLVWYYLAFAVYVGSNIVLAFSAAALCAYIAPAAAGSGIPEVKAYLNGIDAYSILAPSTLFVKIFGSIFAVAGGFVVGKEGPMVHTGACIASLLGQGGSRKYRLTWKWLRYFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRGFMEFCRGGQCGLFGEGGLIMFNIHTENSTYGTPDLIAIVLLGVIGGVFGSLYNYLVDKVLRTYSIINERGPGSKVILVVSISLLTTCISFGLPWLSQCLPCPPNLEDECPTVGRSGNYKNFQCPPGQYNDLASLFFNTNDDVIRNLFTSATDKQFQLSSLFIFFTSIYFLGIITYGIAVPSGLFIPVILAGASYGRIVGRLFGSVATLDVSLYALLGAASFLGGTMRMTVSLCVILLELTNNLLMLPLLMLVLLISKSVADIFNKGVYDQIVKMKGLPFMEAHAEPFMRQLVAGGVASGPLITFSGIEKVDNIMHALKMTNHNGFPVIDEPPFSDSSELCGLVLRSHLLVLLKEKKFTKKKTSIRSEILRSFKAYDFAKPGSGKGVKLEDLDINEEEMEMFVDLHPITNTSPYTVVETMSLAKAAILFHALGLRHLLVVPKTPGRPPIAGILTRHDFMPEYILGLYPYLNPH 735
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4797320 4805203 - Cp4.1LG01g08670.1 Cpe01g00804 462117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00804 735 Gene3D - 569 707 IPR046342 -
Cpe01g00804 735 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 28 71 - -
Cpe01g00804 735 SUPERFAMILY Clc chloride channel 87 545 IPR014743 -
Cpe01g00804 735 ProSiteProfiles CBS domain profile. 670 731 IPR000644 -
Cpe01g00804 735 Gene3D Clc chloride channel 72 544 - -
Cpe01g00804 735 PRINTS Plant CLC chloride channel signature 238 246 IPR002251 GO:0005247|GO:0006821|GO:0016020
Cpe01g00804 735 PRINTS Plant CLC chloride channel signature 270 277 IPR002251 GO:0005247|GO:0006821|GO:0016020
Cpe01g00804 735 PRINTS Plant CLC chloride channel signature 252 262 IPR002251 GO:0005247|GO:0006821|GO:0016020
Cpe01g00804 735 PRINTS Plant CLC chloride channel signature 394 410 IPR002251 GO:0005247|GO:0006821|GO:0016020
Cpe01g00804 735 SUPERFAMILY CBS-domain pair 547 722 IPR046342 -
Cpe01g00804 735 MobiDBLite consensus disorder prediction 1 23 - -
Cpe01g00804 735 CDD CBS_pair_voltage-gated_CLC_euk_bac 546 723 - -
Cpe01g00804 735 Pfam Voltage gated chloride channel 110 524 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Cpe01g00804 735 Pfam CBS domain 672 720 IPR000644 -
Cpe01g00804 735 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 94 735 - -
Cpe01g00804 735 PRINTS Chloride channel signature 122 139 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Cpe01g00804 735 PRINTS Chloride channel signature 442 462 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Cpe01g00804 735 PRINTS Chloride channel signature 474 490 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Cpe01g00804 735 PRINTS Chloride channel signature 153 172 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Cpe01g00804 735 PRINTS Chloride channel signature 217 236 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Cpe01g00804 735 PRINTS Chloride channel signature 492 511 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Cpe01g00804 735 PRINTS Chloride channel signature 530 544 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Cpe01g00804 735 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 28 71 - -
Cpe01g00804 735 MobiDBLite consensus disorder prediction 1 22 - -
Cpe01g00804 735 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 94 735 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00804 Cpe14g00660 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g01122 Cpe-Chr7:9873077 Cpe01g00804 Cpe-Chr1:4797320 8.82E-06 transposed
Cpe12g00206 Cpe-Chr12:1342957 Cpe01g00804 Cpe-Chr1:4797320 0 transposed
Cpe13g01120 Cpe-Chr13:8983128 Cpe01g00804 Cpe-Chr1:4797320 0 transposed
Cpe01g00804 Cpe-Chr1:4797320 Cpe14g00660 Cpe-Chr14:4347565 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00804 K05016 - csv:101209987 1186.4