Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe01g00826 | ATGGTTTATGGGAATGGTGGGTTTGTTTGGGTTTTGTATGCGTTGTTTTTCATGGTGGTCGGTGGGTCCTTCGTCCATGGGGACGGTGGTGCTTGGCTTCATGCTCATGCAACTTTCTATGGAGCTGATCAAAACCCTACTAGCCTTGGAGGAGCATGTGGTTACGACAATACATTTCATGCCGGATTTGGAATAAACACGGCGGCGGTGAGCGGCGCACTTTTCAGAGGAGGAGAGGCTTGCGGCGCTTGCTTCCTAGTAATTTGCAACTACAACGTGGACCCCAAGTGGTGTCTCCGCCGCCGCGCCGTCGCCATCACCGCCACAAACTTCTGCCCCTCCAATAACAACGGGGGCTGGTGCGACCCACCTCGCGCGCACTTCGACATGTCGTCACCTGCCTTTCTTACCATTGCTCGGCAAGGCAACGAAGGGATCGTCCCTGTCCTTTACAAGAGGGTAAGTTGTAGAAGGAAGGGAGGAGTTCGATTCACTTTGAGAGGACAATCAAACTTCAATATGGTGATGATATCGAACGTCGGTGGCAGTGGCGACGTGAAGGCTGCATGGGTTAAAGGGTCAAGGACGAGGACGTGGATGCCCATGCATCGTAATTGGGGGGCAAACTGGCAAGCCAATGTCGACCTTCGAAACCAAAGAATGTCGTTTAAGGTTACTCTAATAGATGGGAGGACATTGGAGTTTGTCAATGTGGTTCCTTCCTCTTGGAGGTTTGGACAGACGTTTTCTTCCATGATTCAGTTTTCT | 768 | 51.43 | MVYGNGGFVWVLYALFFMVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGWCDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGDVKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVPSSWRFGQTFSSMIQFS | 256 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 4910298 | 4911472 | + | Cp4.1LG01g08550.1 | Cpe01g00826 | 462139 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe01g00826 | 256 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 171 | 251 | IPR007117 | - | |
Cpe01g00826 | 256 | Pfam | Expansin C-terminal domain | 162 | 240 | IPR007117 | - | |
Cpe01g00826 | 256 | Gene3D | - | 21 | 157 | IPR036908 | - | |
Cpe01g00826 | 256 | SUPERFAMILY | Barwin-like endoglucanases | 11 | 179 | IPR036908 | - | |
Cpe01g00826 | 256 | PRINTS | Expansin signature | 91 | 102 | IPR002963 | GO:0009664 | |
Cpe01g00826 | 256 | PRINTS | Expansin signature | 160 | 172 | IPR002963 | GO:0009664 | |
Cpe01g00826 | 256 | PRINTS | Expansin signature | 172 | 193 | IPR002963 | GO:0009664 | |
Cpe01g00826 | 256 | PRINTS | Expansin signature | 104 | 114 | IPR002963 | GO:0009664 | |
Cpe01g00826 | 256 | PRINTS | Expansin signature | 208 | 229 | IPR002963 | GO:0009664 | |
Cpe01g00826 | 256 | PRINTS | Expansin signature | 62 | 76 | IPR002963 | GO:0009664 | |
Cpe01g00826 | 256 | PRINTS | Expansin signature | 118 | 135 | IPR002963 | GO:0009664 | |
Cpe01g00826 | 256 | PRINTS | Expansin signature | 237 | 253 | IPR002963 | GO:0009664 | |
Cpe01g00826 | 256 | PANTHER | EXPANSIN-A15 | 12 | 256 | IPR002963 | GO:0009664 | |
Cpe01g00826 | 256 | SUPERFAMILY | PHL pollen allergen | 158 | 251 | IPR036749 | - | |
Cpe01g00826 | 256 | SMART | dpbb_1 | 67 | 151 | IPR007112 | - | |
Cpe01g00826 | 256 | Pfam | Lytic transglycolase | 67 | 151 | IPR009009 | - | |
Cpe01g00826 | 256 | PRINTS | Expansin/Lol pI family signature | 31 | 46 | IPR007118 | GO:0005576 | |
Cpe01g00826 | 256 | PRINTS | Expansin/Lol pI family signature | 144 | 160 | IPR007118 | GO:0005576 | |
Cpe01g00826 | 256 | PRINTS | Expansin/Lol pI family signature | 71 | 89 | IPR007118 | GO:0005576 | |
Cpe01g00826 | 256 | PRINTS | Expansin/Lol pI family signature | 49 | 67 | IPR007118 | GO:0005576 | |
Cpe01g00826 | 256 | PRINTS | Expansin/Lol pI family signature | 237 | 251 | IPR007118 | GO:0005576 | |
Cpe01g00826 | 256 | PRINTS | Expansin/Lol pI family signature | 199 | 213 | IPR007118 | GO:0005576 | |
Cpe01g00826 | 256 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 50 | 161 | IPR007112 | - | |
Cpe01g00826 | 256 | PANTHER | EXPANSIN-A12 | 12 | 256 | - | - | |
Cpe01g00826 | 256 | Gene3D | - | 161 | 256 | IPR036749 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g00826 | Cpe-Chr1:4910298 | Cpe02g01346 | Cpe-Chr2:11913145 | 1.33E-80 | dispersed | |
Cpe01g00826 | Cpe-Chr1:4910298 | Cpe05g00925 | Cpe-Chr5:6080077 | 1.03E-82 | transposed | |
Cpe01g00826 | Cpe-Chr1:4910298 | Cpe13g01039 | Cpe-Chr13:8521044 | 5.53E-83 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe01g00826 | - | - | bhj:120091876 | 485.723 |