Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00833 ATGTCGATGGCCGCCACCTCCACCGCCATCCTCCGCCCCTCCCCTTTTCTCGGCCAAAACAGAGCCTCTTCCAGTAACTCCCTCAGAGATGTCGTCGCCATGGGAACTCCAAAATACACCATGGGAAATCAACTGTGGTATGGACCAGACAGAGTGAAGTACTTGGGGCCGTTTTCCGCTCAGACTCCCTCCTACTTGAACGGAGAGTTCCCCGGCGATTATGGATGGGACACTGCTGGGTTGTCCGCCGATCCCGAGGCCTTCGCCAAGAACAGAGCTCTTGAGGTAATCCACGGGAGGTGGGCGATGTTGGGAGCCTTCGGGTGCATAACACCAGAAGTGCTAGAAAAATGGTTGAAAGTGGACTTCAAGGAGCCAGTCTGGTTCAAGGCCGGAGCCCAGATCTTCTCAGAAGGTGGGCTCGACTACTTGGGGAACCCCAACCTGGTGCACGCCCAGAGCATCCTAGCCGTTTTGGGTTTCCAAGTGGTCCTAATGGGGCTGGTTGAAGGGTTCCGCATCAACGGGCTGGACGGCGTCGGCGAAGGCAACGACCTATACCCAGGGGGTCAGTACTTCGACCCACTCGGACTGGCCGACGACCCCGTCACCTTCGCCGAGCTCAAGGTGAAGGAGATCAAGAACGGGCGGCTGGCCATGTTCTCCATGTTCGGGTTCTTTGTCCAGGCCATCGTGACTGGGAAAGGCCCCCTCGAGAACCTTCTGGACCATCTGGATAACCCTGTGGCCAACAATGCCTGGGTTTACGCCACCAAGTTTGCCCCTGGCTCATAA 795 57.48 MSMAATSTAILRPSPFLGQNRASSSNSLRDVVAMGTPKYTMGNQLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4941837 4945199 - Cp4.1LG01g08270.1 Cpe01g00833 462146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00833 264 Pfam Chlorophyll A-B binding protein 63 230 IPR022796 -
Cpe01g00833 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 264 IPR001344 GO:0009765|GO:0016020
Cpe01g00833 264 Gene3D Chlorophyll a/b binding protein domain 53 257 - -
Cpe01g00833 264 SUPERFAMILY Chlorophyll a-b binding protein 45 261 - -
Cpe01g00833 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 3 264 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00833 Cpe-Chr1:4941837 Cpe04g00672 Cpe-Chr4:6780729 2.09E-126 dispersed
Cpe20g00513 Cpe-Chr20:2981021 Cpe01g00833 Cpe-Chr1:4941837 1.66E-35 dispersed
Cpe01g00833 Cpe-Chr1:4941837 Cpe14g00702 Cpe-Chr14:4610792 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00833 K08914 - mnt:21401705 515.768