Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00854 ATGCAATTCCCAATGCTCTGCCCCAGAGAATTGATCTCTGTTTTCCTTGTTATTCCTCTTCTTCTTGTTTCCAATTTATCTCCCTGTTCCGCACAAGACTACATCATAGGCGACCCCGGAGCAGCTGGCGGAGCAGGCGGCGGAGCAGTCGTCGGAGATGCTGGCGATGATACCAAGGAGAAGCCGGCGGCGGGACCGCCAGAGCATAACAACTGTAATGGCATATACTTGACCTACAATTTCATTTCGCGTGAGAAGGAGCTGCCCCGGTTAAAGAATGCGACGGCTCAGGCTTGGGCCTTTAAATCGGAGGCGACAATTCTGAACTCCGGATTGACTGAGCTCAAGGGCTGGAAGATGTTCATCGGATTTCACCACCACGAGATTCTCGTCTCTTGCTGCAAAAAAGATCCAAAGTTCAAGGAGAAAAAAGCACCCAAGGCCAAGAAAATCAAATTTCTGGCTCGGCAAGATGGAGATCTCTCACTAACGTACGATGTGATGCAATCTTTTGGAAACAACTATCTAGCTCAAGTCACAATCGACAACAACAACCCACTGGGGCGCTTGGATCACTGGAACTTAACCTGGGAATGGATGAAAGGAGAGTTCATTCAAAGCATGAGAGGAGCATACACTCATACAAGAGACATAGCTCAATGCGTCTACGGCCCCGCAGGCCAATACTATCAAGATTTCGACTTCACCGGTGTCATGAGTTGCGATAAGAACCCGGTGATGGCCGATCTACCAGCGCAACGGAAGGACGATCCCAAGATCGGAAAGTTGCCATATTGCTGCAGGAATGGAAGCTTGTTGCCTACCATGATGGATGAAAGCAAAGCAAGGTCTATTTTTCAGCTACAAGTCTTCAAGCTTCCACCAGACATGAACCGAACGGCTCTTACTCCACCACAGAAATGGAAAATCTCAGGTATCCTAAATCCGGAATACGAATGTGGTGCTCCAATCCGAGTCGTACCGACCGAGTTTCCAGACCCAAGCGGGCTTCAATCAACGAGCACGGCCATCGCTAGTTGGCAAGTTGTATGCAACATTACAAAGCCAAAAGTGAAGCAATCAAAATGTTGTGTTTCATTCTCAGCATATTATAATGACTCTGTAATTCCTTGCAATACGTGTGCTTGTGGGTGTGAAGACACTGATACTTCTACTTGCAATCCAAATGCACGCTCAATGCTGCTCCCTCCAGAAGCCCTTTTGGTGCCATTTGATAACAGGACAAAGAAGGCAAGGGCTTGGGCTAAAATTAAGCACTACCCAAATCCAAAGACGATGCCTTGTCCTGATAACTGTGGAGTTAGTCTAAATTGGCATATTAACTCCGATTATGCCGATGGATGGACTGCAAGACTCACACTTTTCAACTGGGAAGATTACCCATTTGAGGATTGGTTCACTGCCGTTCAATTGGGTAAGGCCGGCCGTGGTTACGAAAATGTTTACTCCTTCAATGGAACCAAGCTTCCCAACGTTAAAAATACCATCTTTCTCCAAGGCTTGCCTGGCTTGACTTACTTGATGGGAGAGGTGAATGGTACCAATCCCACATCGGATCCGAGAATTCCAGGAAAGCAGCAGTCCGTGATCTCTTTTAAGAAGAAGGGCCTGCGCGACTTGGACATACAACGAGGTGATGGCTTCCCTATTAAAGTGTTTTTCAACGGCGAGGAATGTGCGCTTCCAAGGGCAATTCCTTTGCCCAGTTCAGCCTGCCGCTGTCCCTACGGTGTCATGCGCCTCGTCTTCATCTTGGCTCTTACTTTGGCGCTTATAACAGATCGCTTCCATTGA 1815 47.77 MQFPMLCPRELISVFLVIPLLLVSNLSPCSAQDYIIGDPGAAGGAGGGAVVGDAGDDTKEKPAAGPPEHNNCNGIYLTYNFISREKELPRLKNATAQAWAFKSEATILNSGLTELKGWKMFIGFHHHEILVSCCKKDPKFKEKKAPKAKKIKFLARQDGDLSLTYDVMQSFGNNYLAQVTIDNNNPLGRLDHWNLTWEWMKGEFIQSMRGAYTHTRDIAQCVYGPAGQYYQDFDFTGVMSCDKNPVMADLPAQRKDDPKIGKLPYCCRNGSLLPTMMDESKARSIFQLQVFKLPPDMNRTALTPPQKWKISGILNPEYECGAPIRVVPTEFPDPSGLQSTSTAIASWQVVCNITKPKVKQSKCCVSFSAYYNDSVIPCNTCACGCEDTDTSTCNPNARSMLLPPEALLVPFDNRTKKARAWAKIKHYPNPKTMPCPDNCGVSLNWHINSDYADGWTARLTLFNWEDYPFEDWFTAVQLGKAGRGYENVYSFNGTKLPNVKNTIFLQGLPGLTYLMGEVNGTNPTSDPRIPGKQQSVISFKKKGLRDLDIQRGDGFPIKVFFNGEECALPRAIPLPSSACRCPYGVMRLVFILALTLALITDRFH 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5055397 5057211 + Cp4.1LG01g08240.1 Cpe01g00854 462167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00854 604 Pfam COBRA-like protein 175 354 IPR006918 GO:0010215|GO:0031225
Cpe01g00854 604 PANTHER COBRA-LIKE PROTEIN 7 132 603 - -
Cpe01g00854 604 PANTHER COBRA-LIKE PROTEIN 7 16 132 - -
Cpe01g00854 604 MobiDBLite consensus disorder prediction 47 69 - -
Cpe01g00854 604 PANTHER COBRA-LIKE PROTEIN 10 132 603 - -
Cpe01g00854 604 PANTHER COBRA-LIKE PROTEIN 10 16 132 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00854 Cpe-Chr1:5055397 Cpe03g01343 Cpe-Chr3:10899780 6.32E-13 dispersed
Cpe01g00854 Cpe-Chr1:5055397 Cpe08g00164 Cpe-Chr8:1061672 4.13E-13 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00854 - - cpep:111805426 1229.93