Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00880 ATGAGGACTGGGAACCGAAAGAGGAAGCTAAGGCTAAGCAAGATCTATTCATTTGCTTGTGGAAGAACTTCATTGAAAGATGAAGATCATTCACAAATTGGGATGCTCGGGTTCTCCCGGGTGGTTTTCTGTAATGATCCTGATTGTTTGGAGGCTGGAATGCGTAATTATGTTAACAACTCTATCAGTTCTACAAAGTACACACCCATCACTTTTGTGCCCAAGTCGCTGTTTGAGCAGTTCAGGAGGGTGGCTAATTTTTACTTCTTGATTGCTGGTATATTAGCCTTCACTCCTCTTGCTCCTTATACTGCTGTCAGTGCAATTGTCCCTCTTATTGCAGTCATTATTGCGACAATGGTTAAAGAAGGTGTTGAAGATTGGAGACGAAAAGCACAGGATATTGAGGTGAATAATAGAATGGTTAAAGTTCATCAAGGCAATGGAGTCTTTGATAATACTGAATGGAAAACTTTGAGGGTTGGAGATATAGTGAAGGTTGAAAAGGATCAATACTTTCCAGCCGACCTTCTTTTGATTTCATCCTGCTATGAGGATGGAATCTGTTATGTAGAAACGATGAACCTTGATGGGGAAACAAATTTAAAGGTAAAGCAAGCACTCGATACAACTGCATTTGCACGTGAGGATTCTAACTTTTTTGACTTTAAGGCTACAATCAAATGTGAAGACCCAAATGCAAATCTTTATACCTTTGTTGGGAGTATGGACTTTGAAGATCAACAATATCCACTTTCTCCACAAAATCTTCTCCTGAGAGACTCCAAACTCCGAAACACAGAATATATATATGGGGCTGTTGTCTTTACTGGCCATGATTCAAAGGTTATTCAGAATTCTACTGATCCACCTTCTAAGAGAAGCAAAGTTGAGAAGAAGATGGATAAAATTATATATCTGTTGTTTAGCTGTCTATTCATGCTGGCCTTCATTGGGTCTATAGTCTTCGGAGTTATGACTAAAGATGATCTTAAAAATGGGAGGACAAAGAGATGGTATCTTAGACCAGATGATTCTACTATTTACTTTGATCCCAAAAATGCACCAGCTGCTGCAATTTTCCACTTTCTGTCAGCACTGATGTTGTATAACTACTTTATCCCTATATCCTTGTATGTGTCTATAGAAGTTGTCAAAGTTCTTCAGAGTATCTTCATCAATCAAGACATTCACATGTATTATGAAGAAGCTGACAAACCAGCACATGCCCGCACCTCCAATTTGAATGAGGAACTTGATGTCATCCAGAAGTTCTTCCGCCTCCTTGCTACTTGTCAAACAGCTATTCCAGATGTTGATGAAAACACAGGCACGGTTTCATATGAAGCTGAATCGCCAGATGAAGCAGCATTTGTAATTGCTGCCAGAGAAATTGGTTTCGAATTCTACCAGAGGACACAGACAAGTATATCGATTCGTGAACTCGATCCTAGGTCTGGAAGGAAGGTTGAAAGGTCATATAAGCTTTTAAATGTTCTGGAGTTTAAGAGCGCCCGGAAGAGGATGTCTGTTATAATAAGAGATGAAGAAGGGAAAGTACTATTACTATGCAAAGGTGCTGACAGTGTCATGTTTGAGAGGCTTGCCAAGAATGCTAGTAAATTTGAAGAGAAAACGAAGGACCATATCAATGAGTACGCTGATGCAGGGCTAAGGACCTTGGTACTTGCTTATCGTGAACTTGATGAGGAGGAATACAAGTTATTTGATAGGCAATTCTATGAAGCTAAGAATTCAGTTAGTGCAGAGAGGGATTCATTGATTGATAAAGTAACAGATCGCATTGAAAGGGATTTAATTCTTCTTGGTTCCACAGCAGTTGAGGACAAGCTTCAAAATGGAGTCCCCGAATGCATAGACAAACTTGCTCAAGCTGGGATTAAGATCTGGGTTTTGACTGGGGACAAGATGGAGACTGCGGTCAATATTGGTTTTGCCTGCAGTTTGCTTAGACAAGGAATGAAACAGATTATTGTATCTCTGGAAACACCAGAAATTCAGGCCTTAGAAAGGACGGGAGAGAAGGATATGATCAGTAAGGCATCAAAAGAAAGTGTCATCCACAAGATAACTCGGGCAAGGTCTCAGCTCACTGCATCAAGTGGAAGCGCAGAGGCTTATGCATTGATAATTGATGGGAAGTCACTTACTTATGCTCTAGAGGATGATGTGAAGGATGCATTCCTTGAGCTTGCAATTGGATGTGCATCTGTTATTTGCTGTCGCTCATCACCAAAGCAGAAAGCAATGGTCACTCGATTGGTTAAACTTGCAACGGGGAAAACAACTTTAGCAATTGGTGATGGCGCAAATGATGTTGGAATGCTTCAGGAAGCAGATATTGGCATTGGAATTAGTGGTGCCGAAGGAATGCAGGCTGTCATGTCGAGTGATATTGCGATTGCTCAGTTCAGATATTTGGAGCGTCTACTACTTGTACATGGACATTGGTGCTACAGGAGATTGTCATCAATGATATGCTACTTTTTCTACAAGAATTTTACCTTTGGTTTTACACTTTTCTTATACGAGGCATACACTTCATTCTCTGCACAACCTGCATATAACGATTGGTTTATGTCACTCTACAATGTTGTGTTCTCCGCACTTCCAGTTGTGGCTCTTGGGGTGTTTGACCAGGACGTGTCTGCAAGATATTGCCTTAAGTTTCCTATGTTGTACCAGCAAGGTGTTCAGAATGTCCTCTTCAGCTGGGCCCGGATACTCAGCTGGATGTTTAATGGTTTGTGCAGTGCGTTGATCATTTTCTTTTTCTGCACAAATGGAATGAAGCATCAGGCATTTAACCCCGATGGGAAAACTGTGGGGAGAGATATCCTTGGAGCGACAATGCTGTCATGTGTTGTTTGGGTCGTCAACTTGCAGATGGCACTCTCTGTTAGCTACTTCACCTTGTTGCAACATATTTTCATCTGGGCTTCAATCTTTATCTGGTACCTCTTTTTGATGATGTATGGAGCCTTCCCTGCCAACATTTCAGGAAATGCATATCGTGTGTTCCTCGAAGCCCTTGCTCCTGCCGGGTCTTATTGGGTTCTGCTGATATTTGTGGTGATCTCTACTCTCATTCCATTCTTTGTATACTCAGCATTACAGGTGAATTTCTTTCCGATGTACCATGAAAAAATACAGTGGATCAGGCACGATGGTAAGGGTCAGATAGACAATCCTGAGTTTGTCAATATGGTCAGGCAAAGCTCGTTGAAACCAACAACTGTCGGCTTCACTGCTCGTTTGGCAGCCAAAATAAGAAGAGATAATTCATAG 3309 41.25 MRTGNRKRKLRLSKIYSFACGRTSLKDEDHSQIGMLGFSRVVFCNDPDCLEAGMRNYVNNSISSTKYTPITFVPKSLFEQFRRVANFYFLIAGILAFTPLAPYTAVSAIVPLIAVIIATMVKEGVEDWRRKAQDIEVNNRMVKVHQGNGVFDNTEWKTLRVGDIVKVEKDQYFPADLLLISSCYEDGICYVETMNLDGETNLKVKQALDTTAFAREDSNFFDFKATIKCEDPNANLYTFVGSMDFEDQQYPLSPQNLLLRDSKLRNTEYIYGAVVFTGHDSKVIQNSTDPPSKRSKVEKKMDKIIYLLFSCLFMLAFIGSIVFGVMTKDDLKNGRTKRWYLRPDDSTIYFDPKNAPAAAIFHFLSALMLYNYFIPISLYVSIEVVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELDVIQKFFRLLATCQTAIPDVDENTGTVSYEAESPDEAAFVIAAREIGFEFYQRTQTSISIRELDPRSGRKVERSYKLLNVLEFKSARKRMSVIIRDEEGKVLLLCKGADSVMFERLAKNASKFEEKTKDHINEYADAGLRTLVLAYRELDEEEYKLFDRQFYEAKNSVSAERDSLIDKVTDRIERDLILLGSTAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAVNIGFACSLLRQGMKQIIVSLETPEIQALERTGEKDMISKASKESVIHKITRARSQLTASSGSAEAYALIIDGKSLTYALEDDVKDAFLELAIGCASVICCRSSPKQKAMVTRLVKLATGKTTLAIGDGANDVGMLQEADIGIGISGAEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRLSSMICYFFYKNFTFGFTLFLYEAYTSFSAQPAYNDWFMSLYNVVFSALPVVALGVFDQDVSARYCLKFPMLYQQGVQNVLFSWARILSWMFNGLCSALIIFFFCTNGMKHQAFNPDGKTVGRDILGATMLSCVVWVVNLQMALSVSYFTLLQHIFIWASIFIWYLFLMMYGAFPANISGNAYRVFLEALAPAGSYWVLLIFVVISTLIPFFVYSALQVNFFPMYHEKIQWIRHDGKGQIDNPEFVNMVRQSSLKPTTVGFTARLAAKIRRDNS 1102
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5169306 5177682 - Cp4.1LG01g07930.1 Cpe01g00880 462193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00880 1102 CDD P-type_ATPase_APLT_Dnf-like 59 933 - -
Cpe01g00880 1102 SUPERFAMILY HAD-like 548 828 IPR036412 -
Cpe01g00880 1102 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 420 1099 - -
Cpe01g00880 1102 Pfam Cation transport ATPase (P-type) 444 535 - -
Cpe01g00880 1102 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 409 610 IPR023299 GO:0000166
Cpe01g00880 1102 Pfam Phospholipid-translocating ATPase N-terminal 42 108 IPR032631 -
Cpe01g00880 1102 Pfam E1-E2 ATPase 139 384 - -
Cpe01g00880 1102 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 5 419 - -
Cpe01g00880 1102 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 5 419 - -
Cpe01g00880 1102 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 420 1099 - -
Cpe01g00880 1102 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 739 857 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe01g00880 1102 Gene3D - 113 288 - -
Cpe01g00880 1102 SUPERFAMILY Calcium ATPase, transmembrane domain M 56 1050 IPR023298 -
Cpe01g00880 1102 SUPERFAMILY Calcium ATPase, transduction domain A 141 285 IPR008250 -
Cpe01g00880 1102 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 421 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cpe01g00880 1102 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 421 1058 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cpe01g00880 1102 Gene3D - 456 608 IPR023299 GO:0000166
Cpe01g00880 1102 Pfam Phospholipid-translocating P-type ATPase C-terminal 801 1051 IPR032630 -
Cpe01g00880 1102 Gene3D - 609 813 IPR023214 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00880 Cpe-Chr1:5169306 Cpe20g00099 Cpe-Chr20:522155 0 dispersed
Cpe01g00880 Cpe-Chr1:5169306 Cpe13g00024 Cpe-Chr13:204020 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00880 K01530 - csv:101205800 1275.77