Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00906 ATGGTTGAGAAGGAATTTTTCACTGAATATGGTGAAGCTACTCAATATGAAATTCAAGAACTTATAGGTAGAGGGAGCTATGGAGTTGTTGCATCTGCCATAGACACTCATTCTGGTGAGAAAGTTGCTATCAAGAAGATAAATAATGTCTTCGAGCATGTTTCTGATGCCACACGTATTCTAAGAGAAATAAAGCTGCTCCGATTTCTACGACATCCCGATATCGTTGATATAAAACATATATTGCTCCCTCCATGTAGAAGGGAGTTTAAAGATTTGTACATTGTTTTTGAATTGATGGAGTGTGATCTTCATCATGTACTCAAGACTAATGATGATCTTACCCCTCAGCATCATCAGTTTTTCTTGTATCAACTTCTTAGAGCCTTGAAGTATATACATTCAGCGCATGTGTTCCATAGAGATTTGAAGCCGAAGAATATACTTGCTAATGCTGACTGCAAACTGAAGATTTGTGACTTTGGACTTGCGCGTGCATCTTTTAGTGATGCCCCATCTGCCATTTTTTGGACGGATTATGTGGCTACTCGATGGTACCGTGCTCCTGAACTCTGTGGTTCTTTTCTCTCAAAGATTCGTAACGAAAAATCTAAAAGGTATTTGAGTGGCATGAGAAAAAAACATCCAATTCCTCTGTCAAGAAAGTTCCCCAATGCAGATCCACTAGCTCTTCGTTTACTCGAACGTCTGCTTGCATTTGATCCCGATGATCGTCCTTCTGCAGAGGAGGCATTAGCTGATCCATACTTCCATGGACTGGCAAATCTGGAGGATGAACCATCCAGGCAACCCATTTCAAAACTCGAGTTCGAGTTTGAAAGGGGAAAGTTGACACAAGATGATGTCAGAGAGCTTATTTATAGAGAAATTTTAGAGTACCACCCTCAAATGTTACAGGGCTACCTTCAAGGTTCTGGGAGTCACTTCTTGTATCCCAGTGGAATTGATCGATTCAAGCGTCAATTTGATAATCTTGAGGAACGTTCTGGTAAAGTTGAGAGACGCACAGGCAGTCCACTTCTAAGGAAGCATGCCTCCTTGCCTAGGGAGCGAATATATACACCACGAGATGAAGACGATGATGAAAAATGTATATCGGAACGGAGAACTGCAGCGCTTCGAAGCCCTCCTGGACCTGCTTGTTCATTAACTGCTCAGAATGGTTCTGTTCATGTAGATTGCAATAGCTATAACCTGTTGAGGAATGCAAGCGGCCCTGGCTGTTCTTCCATGATCGGCAACTTCTTCGAGCTGGGTCCATGGCGGGTCAATTTCCACAAAAAAGAAACCGACCCTGTTTCCCTAATCCCCAATACAGGCTCGTGGAATCGAAGATTTGGGGTTCTATTTCTCGACAATCCAATCGGAACTGGCTTCAGTATTGCAGCAACTAAAGATGAGATCCCTAAAAACCAATACTCTGTTTCTAAGCATCTTTTTTCTGCAATTTCTTCGTTTATTGAACAGGATATTACGTTTAAGAATCGACCCATTTACATAACAGGGGAGAGCTATGCAGGGAAATATGTTCCCTCAATTGGGTATTACATTTTGAAGAAAAACCCCAAATTACCTGTTGATAAGAGGCTCAATTTAGCTGGTGTAGCCATTGGAAATGGGCTAACAGATCCCATAACTCAAGTAGCCACTCATGCGTTGAATGCTTACTATTCTGGGCTGATTAACGAAAGGCAAAAAAAGGAACTGGAAATCGCTCAATTGGAGGCTGTGGAGCTCACTAAAAAGGGGAATTGGAGTGAGGCCACAAATGCAAGGAGTAAGGTCTTGAATTTGCTCAAGAACATGACAGGATTAGCCACTCTGTATGATTATACAAGAAAATCTCCTTATAATTCTGAATTGGTAGCTGAGTTCTTGAGCTTCAAGGAGGTGAAGAGGGCATTGGGAGTGAATGAGTCCATGGTTTTCGAAGAGTGTAGCGATCTTGTTGGGGAGGTTTTGAAAGATGATGTGATGAAGAGTATGAGATATAAGGTTGATTATCTGGTGAAGAACAGTAAGGTATTGGTTTACCAAGGGCAGTTTGATTTGAGGGACGGCGTGGTTTCAACGGAGGCTTGGTTGAAGAAGGTGAAATGGGGTGAGATTGAGAGGTTTTTGGGAGCTGACAGAAAGATTTGGAGTGTTGGAGATGAGTTAGCTGGTTATGTTCAGACATGGAAGAGTTTGAGCAATGCTGTCGTGTTGGGAGCTGGTCATCTTGTTCCTTCTGATCAAGCTTTGAACTCTCAAGCAATGATTGAAGATTGGGTGTTGGAGAAGGGACTGTTTGGTGATGATAATGCTGAAGAGAAGAAGCCTTTTGGTGCTAATGATTTTGGGGTTTGGTGA 2373 42.18 MVEKEFFTEYGEATQYEIQELIGRGSYGVVASAIDTHSGEKVAIKKINNVFEHVSDATRILREIKLLRFLRHPDIVDIKHILLPPCRREFKDLYIVFELMECDLHHVLKTNDDLTPQHHQFFLYQLLRALKYIHSAHVFHRDLKPKNILANADCKLKICDFGLARASFSDAPSAIFWTDYVATRWYRAPELCGSFLSKIRNEKSKRYLSGMRKKHPIPLSRKFPNADPLALRLLERLLAFDPDDRPSAEEALADPYFHGLANLEDEPSRQPISKLEFEFERGKLTQDDVRELIYREILEYHPQMLQGYLQGSGSHFLYPSGIDRFKRQFDNLEERSGKVERRTGSPLLRKHASLPRERIYTPRDEDDDEKCISERRTAALRSPPGPACSLTAQNGSVHVDCNSYNLLRNASGPGCSSMIGNFFELGPWRVNFHKKETDPVSLIPNTGSWNRRFGVLFLDNPIGTGFSIAATKDEIPKNQYSVSKHLFSAISSFIEQDITFKNRPIYITGESYAGKYVPSIGYYILKKNPKLPVDKRLNLAGVAIGNGLTDPITQVATHALNAYYSGLINERQKKELEIAQLEAVELTKKGNWSEATNARSKVLNLLKNMTGLATLYDYTRKSPYNSELVAEFLSFKEVKRALGVNESMVFEECSDLVGEVLKDDVMKSMRYKVDYLVKNSKVLVYQGQFDLRDGVVSTEAWLKKVKWGEIERFLGADRKIWSVGDELAGYVQTWKSLSNAVVLGAGHLVPSDQALNSQAMIEDWVLEKGLFGDDNAEEKKPFGANDFGVW 790
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5334482 5339681 + Cp4.1LG01g07680.1 Cpe01g00906 462219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00906 790 Gene3D alpha/beta hydrolase 404 777 IPR029058 -
Cpe01g00906 790 Gene3D Phosphorylase Kinase; domain 1 15 99 - -
Cpe01g00906 790 ProSitePatterns Serine carboxypeptidases, serine active site. 507 514 IPR018202 GO:0004185
Cpe01g00906 790 Coils Coil 322 342 - -
Cpe01g00906 790 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 197 402 - -
Cpe01g00906 790 ProSitePatterns Protein kinases ATP-binding region signature. 22 46 IPR017441 GO:0005524
Cpe01g00906 790 ProSitePatterns MAP kinase signature. 51 154 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cpe01g00906 790 ProSitePatterns Serine carboxypeptidases, histidine active site. 737 754 IPR033124 GO:0004185
Cpe01g00906 790 PRINTS Carboxypeptidase C serine protease (S10) family signature 445 457 IPR001563 GO:0004185|GO:0006508
Cpe01g00906 790 PRINTS Carboxypeptidase C serine protease (S10) family signature 493 518 IPR001563 GO:0004185|GO:0006508
Cpe01g00906 790 PRINTS Carboxypeptidase C serine protease (S10) family signature 458 468 IPR001563 GO:0004185|GO:0006508
Cpe01g00906 790 PRINTS Carboxypeptidase C serine protease (S10) family signature 737 750 IPR001563 GO:0004185|GO:0006508
Cpe01g00906 790 Gene3D Phosphorylase Kinase; domain 1 281 303 - -
Cpe01g00906 790 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 4 198 - -
Cpe01g00906 790 ProSiteProfiles Protein kinase domain profile. 16 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g00906 790 SUPERFAMILY Protein kinase-like (PK-like) 13 262 IPR011009 -
Cpe01g00906 790 Pfam Serine carboxypeptidase 412 765 IPR001563 GO:0004185|GO:0006508
Cpe01g00906 790 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 197 402 - -
Cpe01g00906 790 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 4 198 - -
Cpe01g00906 790 Coils Coil 564 589 - -
Cpe01g00906 790 SUPERFAMILY alpha/beta-Hydrolases 412 766 IPR029058 -
Cpe01g00906 790 Gene3D Transferase(Phosphotransferase) domain 1 195 280 - -
Cpe01g00906 790 Gene3D Transferase(Phosphotransferase) domain 1 100 194 - -
Cpe01g00906 790 SMART serkin_6 16 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g00906 790 Pfam Protein kinase domain 16 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00906 Cpe-Chr1:5334482 Cpe04g01376 Cpe-Chr4:11169248 0 dispersed
Cpe01g00034 Cpe-Chr1:232257 Cpe01g00906 Cpe-Chr1:5334482 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62136 PF00450 Peptidase_S10 1.60E-84 CL0028 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00906 - - csv:101204645 686.797