Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00907 ATGTTGATATCGATATCTTCTCGTGTTCTTGTCTGTGTTCTTTTGTTCGTCGTAGGCTGCGTCGGTGCTGTAGAAATCGATGAGGAAAAGAAACATTTCATTGTCTTCCTGGAAATGAAGCCTGATTTGAATGAATTTGATGCAGTGGAAACACATCTTAATGTTCTCATGTCAGTGAAGGAAAGGTGGGTTAGCTATGTCGAGGCGGAGGAGTCGATGGTGTATAGTTACACAAAAAGCTTCAATGCCTTTGCAGCCAAGCTAAATGAAGAGGAAGCCCTAGCATTGTCAAAGAGGGAAGACGTGCATCACGTGATTCCAAACCAGTATAGAAAACTACAAACAACACGATCATGGGACTTCATCGGATTGCCTTCCAAAGCCAGAAGAAATTCCAAAGAGACAGATATTATCGTGGGTTTATTTGATACCGGGATCACTCCAACCGCTGATAGCTTTAAAGATGATGGGTTTGGTCCTCCACCCAAAAAATGGAAGGGCACGTGTCACCATTTCGCCAATTTCACCGGCTGCAACAGAAAACTCATCGGAGCAAGATATTTCAAGCTCGACGGCAACCCGGATCCGGCCGACATCTTGTCGCCGATAGACGTCGATGGCCACGGCACGCATACGTCATCAACGGCAACAGGTAATGCAGTTGCGGGAGCCAGCCTCTCTGGTCTGGCCAAAGGAACTGCCCGTGGAGGCGTGCCGTCCGCCAGAGTTGCCATGTACAAGGTCTGCTGGGCTAGCACTGGGTGCGCTGATATGGATATTCTAGCCGCCTTTGACGCTGCCATACATGATGGCGTCGATGTCATTTCAATATCAATCGGCGGCGGCGCCTTTGGCAATTACTCCGATGACTCCATCTCCATTGGGGCGTTTCATGCCTTGAAGAAGGGTATCATCACCGTGACCTCCGCCGGAAACGACGGTCCGACTCCCGGCAGTGTCGTTAACCACGCGCCGTGGATTGTGACGGTTGGTGCCAGCGCGATTGATCGGAAATTTATTAGTCTATTAGAGTTGGGCAATGGGAAGAACATCTCGGGAGTAGGGATAAACATATTCAATCCAAAGAAAAAAATGTACCCATTAGTGTATGGAGGGGATGTGGCGAGGGGCGCAGAGAACAGAGAGAGCGCAAGCCATTGCGCGGAGGACTCGCTTGATCCAAGCAAGGTGAAGGGCAGCCTTGTGTTCTGCGAATTGATCACTTGGGGCGTTGATTCTGTTGTCAATGCGCTTGGTGCCAACGGCGCTATCATTCAAAGCGATGAGTATCTTGACAATGCTAATATCTTCATGGCTCCTGCCACCATGGTTAGCAGCTCTGTTGGTGCTGTTATTCACTCCTATATCAAGTCCACCAGAACCCCCACGGCACCGGACATAGCAGCGCCGGGAGTGGACATATTGGCCGGTTACACGCCGCTGAAGTCACTAACAGGGCAGGAGGGTGACACCCAATTCTCCAAATTTACACTCATGTCTGGCACTTCCATGGCCTGCCCCCACGTCGCCGCCGCCGCCGCCTATGTCAAGTCTTTCCATCCGCTTTGGTCTCCTGCCGCCATTAGATCCGCCCTGATCACCACCGCGAGTCGGATCAGCCGACGGCTGAATCCTGATGGCGAATTTGCATATGGAGCTGGCAATCTAAATCCATCGAGAGCCATAAATCCTGGCCTAATCTATGATCTCAATGAAATGTCATACATCCAATTCCTTTGTAGGGAAGGCTACACGGGTTCTTCAATTGGCGTCCTCGCTGGAACTAAATCCATAAACTGCTCTACTTTAATCCCGGGGCATGGACATGACTCTCTCAATTATCCAACCTTTCAACTCAGGCTCAAGAGCCCCCGACGAGCGATGTCCACCGTGTTCCGACGACGAGTCACCAACGTCGGACACCCCGTATCTGTCTACAATGCCACCATCAAGGCTCCCCCTGGGGTGGAGATCACGGTTACACCGAGCACATTGTCATTTTTACGGCTGCAGCAGAAGCGGAGCTTTAAGGTGGCTGTGAAGGCCGGTCCTTTGGCGTCGGGGAAAATGGTGTCGGGTTCGGTTGCTTGGATCGGAGCTCGACATGCTGTGAGAAGTCCAATTGTTGTTTATAGCCCTGAGGATGAAGAAGTATTTGTGAGGGAATGA 2169 50.85 MLISISSRVLVCVLLFVVGCVGAVEIDEEKKHFIVFLEMKPDLNEFDAVETHLNVLMSVKERWVSYVEAEESMVYSYTKSFNAFAAKLNEEEALALSKREDVHHVIPNQYRKLQTTRSWDFIGLPSKARRNSKETDIIVGLFDTGITPTADSFKDDGFGPPPKKWKGTCHHFANFTGCNRKLIGARYFKLDGNPDPADILSPIDVDGHGTHTSSTATGNAVAGASLSGLAKGTARGGVPSARVAMYKVCWASTGCADMDILAAFDAAIHDGVDVISISIGGGAFGNYSDDSISIGAFHALKKGIITVTSAGNDGPTPGSVVNHAPWIVTVGASAIDRKFISLLELGNGKNISGVGINIFNPKKKMYPLVYGGDVARGAENRESASHCAEDSLDPSKVKGSLVFCELITWGVDSVVNALGANGAIIQSDEYLDNANIFMAPATMVSSSVGAVIHSYIKSTRTPTAPDIAAPGVDILAGYTPLKSLTGQEGDTQFSKFTLMSGTSMACPHVAAAAAYVKSFHPLWSPAAIRSALITTASRISRRLNPDGEFAYGAGNLNPSRAINPGLIYDLNEMSYIQFLCREGYTGSSIGVLAGTKSINCSTLIPGHGHDSLNYPTFQLRLKSPRRAMSTVFRRRVTNVGHPVSVYNATIKAPPGVEITVTPSTLSFLRLQQKRSFKVAVKAGPLASGKMVSGSVAWIGARHAVRSPIVVYSPEDEEVFVRE 722
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5341879 5346704 + Cp4.1LG01g07660.1 Cpe01g00907 462220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00907 722 PRINTS Subtilisin serine protease family (S8) signature 204 217 IPR015500 -
Cpe01g00907 722 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Cpe01g00907 722 PRINTS Subtilisin serine protease family (S8) signature 500 516 IPR015500 -
Cpe01g00907 722 CDD Peptidases_S8_3 112 537 IPR034197 -
Cpe01g00907 722 ProSitePatterns Serine proteases, subtilase family, serine active site. 501 511 IPR023828 -
Cpe01g00907 722 Gene3D - 336 463 - -
Cpe01g00907 722 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 33 464 - -
Cpe01g00907 722 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 464 IPR045051 -
Cpe01g00907 722 ProSiteProfiles Serine proteases, subtilase domain profile. 118 562 - -
Cpe01g00907 722 Pfam Fibronectin type-III domain 612 710 IPR041469 -
Cpe01g00907 722 SUPERFAMILY Subtilisin-like 13 584 IPR036852 GO:0004252|GO:0006508
Cpe01g00907 722 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 114 IPR037045 -
Cpe01g00907 722 Pfam Subtilase family 136 554 IPR000209 GO:0006508|GO:0008236
Cpe01g00907 722 Gene3D Peptidase S8/S53 domain 136 335 IPR036852 GO:0004252|GO:0006508
Cpe01g00907 722 Gene3D Peptidase S8/S53 domain 464 575 IPR036852 GO:0004252|GO:0006508
Cpe01g00907 722 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 464 712 IPR045051 -
Cpe01g00907 722 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 464 712 - -
Cpe01g00907 722 Pfam Peptidase inhibitor I9 48 113 IPR010259 -
Cpe01g00907 722 CDD PA_subtilisin_like 343 464 - -
Cpe01g00907 722 Gene3D - 579 712 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00907 Cpe-Chr1:5341879 Cpe01g01068 Cpe-Chr1:6290743 0 dispersed
Cpe01g00036 Cpe-Chr1:241885 Cpe01g00907 Cpe-Chr1:5341879 2.99E-08 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00907 - - csv:101206801 1129.78