Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00937 ATGCACCGTGGAAACTCCGACGTCAACGCCTTTCTCAGCCGTTCTTCCTATTTCGGTTCCCTGTGTGGCCGTTACCGTCGCCACCGGCCAATGCTCATTCCTACTGCCCTCAACGCCCTCAAATCCTCAAGGTCAATATCTTGGTCGCCGACGGGTAGGTTCCAGCAAACCTTGGCGGGATGTCTGGAGCTGAGTGGGATATCTCTGCATTCAGGGAAGGTTTCGAAAGTGAAGTTATGTCCGGAATTTGCAGGCAGAGGGAGGTATTTTGATTTCAAGTCCAACTTCATTCCTGCCTCGATCGATTATGCTGAAGAGTCGTCTCTTTGTACGACGCTCTCTAAGGATGGGTTTAAAATTCGAACTGTTGAGCATTTGCTTTCTGCCCTGGAGGCCATGGGGGTTGACAATTGTAGGATTGAGATAGCGAATGAAGACGCTAAAGACAGTGAAGTCGAGGTTCCAATTTTGGATGGATCTGCGTGTAAATGGGTGGATGCAATAGAGGAGGTTGGTCTTAAGTTGGCTATAGACCAGCGTGGCAACTGCTGTGAAAAAATGGCACCATATGTAAATCAACCTGTCTATGCGTGGAGGAATGACTGTTATCTTGTTGCTTTTCCAGCCTCAGCAGTTCGTATTACTTATGGAATTGACTTTCCTCAGGTGCCTGGCATTGGCTGCCAATGGTTTTCTACTGCTCCTTTGGACAATATGTTCTATGCCGAGCAAATAGCTCCATCAAGAACCTTTTGCATTTACGAGGAGGTAGAGCAAATGCGTAATATGGGGCTCATAAGAGGAGGCTCAATAGAAAATGCTTTAGTTTGCAGTGTCAGTAAAGGTTGGATCAATCCCCCATTGCGTTTCCATGATGAACCTTGTCGCCACAAGGTTTTAGATTTCATTGGTGATATCTCACTTTTTGCACGGTTAGGCAGTCAAGGGCTTCCGGTGGCACACATAGTGGTTTACAAGGTAAGTTCTTTGTGA 993 46.83 MHRGNSDVNAFLSRSSYFGSLCGRYRRHRPMLIPTALNALKSSRSISWSPTGRFQQTLAGCLELSGISLHSGKVSKVKLCPEFAGRGRYFDFKSNFIPASIDYAEESSLCTTLSKDGFKIRTVEHLLSALEAMGVDNCRIEIANEDAKDSEVEVPILDGSACKWVDAIEEVGLKLAIDQRGNCCEKMAPYVNQPVYAWRNDCYLVAFPASAVRITYGIDFPQVPGIGCQWFSTAPLDNMFYAEQIAPSRTFCIYEEVEQMRNMGLIRGGSIENALVCSVSKGWINPPLRFHDEPCRHKVLDFIGDISLFARLGSQGLPVAHIVVYKVSSL 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5561632 5565636 + Cp4.1LG01g07380.1 Cpe01g00937 462250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00937 330 SUPERFAMILY Ribosomal protein S5 domain 2-like 54 174 IPR020568 -
Cpe01g00937 330 SUPERFAMILY Ribosomal protein S5 domain 2-like 193 311 IPR020568 -
Cpe01g00937 330 Gene3D lpxc deacetylase, domain 2 190 329 IPR011334 GO:0008759|GO:0009245
Cpe01g00937 330 Gene3D lpxc deacetylase, domain 1 53 180 IPR015870 GO:0008759|GO:0009245
Cpe01g00937 330 TIGRFAM lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 55 310 IPR004463 GO:0008759|GO:0009245
Cpe01g00937 330 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 31 328 IPR004463 GO:0008759|GO:0009245
Cpe01g00937 330 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 55 326 IPR004463 GO:0008759|GO:0009245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00937 K02535 - csv:101205101 548.51