Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00994 ATGGATCTTGAGCATGGGAAGTGTTGGGATACTTCAAAGAAGGATTCTTGGAAAACGGTTCTTGTATTGGCCTATCAAAGCCTTGGTGTCGTCTATGGCGATTTAAGCATCTCTCCCCTCTACGTTTACAGAAGCACTTTTGCAGAAGACATCCAACATTCAGATACTAATGAAGAAATCTATGGTGTTCTTTCATTTGTCTTCTGGACTCTCACTATAGTTCCCCTTTTCAAGTATGTCTTTGTGGTTCTTAGAGCTGATGACAATGGTGAAGGTGGAACTTTTGCTCTATACTCATTAATTTGCAGACATGCCAAAGTAAGCCTTCTCCCCAACAAACAAGTTGCAGATGAAGCTCTTTCCACTTACTTGCTAGAACATCCACCGGAGAATAAGAAGCAATCTAAGGTTAAATTGTTGCTGGAGAAGCACAGAGCTCTTCACACTGCCTTGTTGATTCTTGTTCTTCTAGGAACTTGTATGGTTATTGGAGATGGGCTCCTCACTCCTGCCATTTCTGTCTTTTCAGCAGTTTCTGGACTTGAGTTATCCATGACCAAGGCACACCATCAGTATGCAGTGGTTCCAATCACTTGCTTTATCTTGGTTTGTCTATTTGCACTTCAACACTATGGGACACATCGAGTCGGCTTCGTCTTTGCTCCCATTGTATTGACTTGGCTACTCTGCATCAGTACCCTTGGCATATACAATATTATACACTGGAATCCACATGTTTATCGAGCTCTTTCACCATATTACATGTTCAAGTTTTTGGAGAAAACGAGGAAGAGCGGTTGGATGTCGTTGGGGGGTATATTGTTGTGCATAACAGGCTCAGAAGCAATGTTTGCTGATCTTGGTCACTTCTCATACACTGCAATACAGATTGCTTTCACTTTTCTGGTGTATCCAGCGCTTATATTGGCATACATGGGCCAAGCTGCTTACTTATCACAACATCACCATACCACCAAAAACATTGGCTTCTATGTTTCCGTTCCAGTCTTTTCAGCAGTTTCTGGACTTGAGTTATCCATGACCAAGGCACACCATCAGTATGCAGTGGTTCCAATCACTTGCTTTATCTTGGTTTGTCTATTTGCACTTCAACACTATGGGACACATCGAGTCGGCTTCGTCTTTGCTCCCATTGTATTGACTTGGCTACTCTGCATCAGTACCCTTGGCATATACAATATTATACACTGGAATCCACATGTTTATCGAGCTCTTTCACCATATTACATGTTCAAGTTTTTGGAGAAAACGAGGAAGAGCGGTTGGATGTCGTTGGGGGGTATATTGTTGTGCATAACAGGCTCAGAAGCAATGTTTGCTGATCTTGGTCACTTCTCATACACTGCAATACAGATTGCTTTCACTTTTCTGGTGTATCCAGCGCTTATATTGGCATACATGGGCCAAGCTGCTTACTTATCACAACATCACCATACCACCAAAAACATTGGCTTCTATGTTTCCGTTCCAGAGAGTGTGAGGTGGCCAGTGCTTACAATTGCTATACTTGCTTCGGTTGTGGGAAGCCAAGCAATCATTAGTGGAACATTCTCCATTATTAACCAGAGCCAGTCCCTTGGTTGCTTCCCTAGAGTGAAGGTCGTTCATACCTCTGATAAGATCCATGGCCAAATCTACATTCCAGAGATCAACTGGATTCTTATGATTCTCTGTGTCGCTGTTACCATCGGATTTAGAGACATAAAACATCTCGGAAATGCTTCAGGTCTGGCTGTAATGACTGTGATGTTAGTGACAACATGTCTTACATCTTTGGTGATTGTTCTCTGTTGGAACAAATCTCCACTTTTGGCTCTCTCCTTCTTGATCTTCTTTGGATCTGTTGAATTGCTTTACTTCTCAGCTTCACTCACCAAGTTCAGGGAGGGCGCTTGGCTCCCCATTCTTTTAGCTCTCTTCCTCATGACCATTATGTTTGTATGGCACTTTGCCACCATCAAGAAGTATGAATTTGATCTTCACAACAAGGTTTCATTAGAATGGTTACTAGCATTGGGGCCGAGCCTTGGGATTGCTCGTGTCCCGGGCATTGGATTAGTCTTCACTGATCTTACCTCAGGCATCCCTGCCAACTTCTCCCGGTTTGTCACCAACCTCCCGGCATTTCATCGCATTCTTGTCTTTGTATGTATAAAGTCGGTACCGGTTCCCTTTGTACCTCCAGCTGAGCGATATCTCGTCGGAAGAGTAGGCCCAGCTACACATAGGTCGTACAGGTGCATTGTTCGATATGGCTACCGTGATGTTCACCAGGATGTGGACTCATTTGAATCTGAATTGGTCAAGAAACTGGCAGACTTCATCCGCTATGATTGGTACAGAAAGCAAAGAGGCAACTCTTGCAGCGAGGACGATGCATCCCATTCAAATGACTCAACGGGCGAGTGTCGACTGGCTGTGATTGGAACCATAGCATTTGCAGATGCAACTGCTTATGAAGAAACTGTGCAACCTGGAAGTGTATCGGTCGGGTTCCGAACTGTCGATAGCATTGGTGATGTGATCGAAATGGAGCCAATGGGAGAAGAACGAAGAGTCAGGTTTGCTATAGATGATGATGATTTTGAAGGTGACTCACAAGCTGAAACAGAAGCCTTGCTGCATGAAGAGCTAGAAGACCTTGTAGCAGCACAGCAATCTGGGACGGCGTTCATTCTCGGGCATTCGCACGTGCGGGCAAAGCAAGGATCGTCCGTGTTGAAGAGGCTGGCTATTAACTATGGCTACAACTTTCTGAGAAGGAATTGCAGAGGCGCAGATGTTGCACTTAAGGTGCCACCAGTGTCTCTTCTTGAAGTGGGCATGGTTTATGTTGTATAA 2862 44.27 MDLEHGKCWDTSKKDSWKTVLVLAYQSLGVVYGDLSISPLYVYRSTFAEDIQHSDTNEEIYGVLSFVFWTLTIVPLFKYVFVVLRADDNGEGGTFALYSLICRHAKVSLLPNKQVADEALSTYLLEHPPENKKQSKVKLLLEKHRALHTALLILVLLGTCMVIGDGLLTPAISVFSAVSGLELSMTKAHHQYAVVPITCFILVCLFALQHYGTHRVGFVFAPIVLTWLLCISTLGIYNIIHWNPHVYRALSPYYMFKFLEKTRKSGWMSLGGILLCITGSEAMFADLGHFSYTAIQIAFTFLVYPALILAYMGQAAYLSQHHHTTKNIGFYVSVPVFSAVSGLELSMTKAHHQYAVVPITCFILVCLFALQHYGTHRVGFVFAPIVLTWLLCISTLGIYNIIHWNPHVYRALSPYYMFKFLEKTRKSGWMSLGGILLCITGSEAMFADLGHFSYTAIQIAFTFLVYPALILAYMGQAAYLSQHHHTTKNIGFYVSVPESVRWPVLTIAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVVHTSDKIHGQIYIPEINWILMILCVAVTIGFRDIKHLGNASGLAVMTVMLVTTCLTSLVIVLCWNKSPLLALSFLIFFGSVELLYFSASLTKFREGAWLPILLALFLMTIMFVWHFATIKKYEFDLHNKVSLEWLLALGPSLGIARVPGIGLVFTDLTSGIPANFSRFVTNLPAFHRILVFVCIKSVPVPFVPPAERYLVGRVGPATHRSYRCIVRYGYRDVHQDVDSFESELVKKLADFIRYDWYRKQRGNSCSEDDASHSNDSTGECRLAVIGTIAFADATAYEETVQPGSVSVGFRTVDSIGDVIEMEPMGEERRVRFAIDDDDFEGDSQAETEALLHEELEDLVAAQQSGTAFILGHSHVRAKQGSSVLKRLAINYGYNFLRRNCRGADVALKVPPVSLLEVGMVYVV 953
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5894275 5902037 + Cp4.1LG01g11670.1 Cpe01g00994 462307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00994 953 Pfam K+ potassium transporter 334 762 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe01g00994 953 PANTHER POTASSIUM TRANSPORTER 2 1 335 - -
Cpe01g00994 953 PANTHER POTASSIUM TRANSPORTER 2 336 953 - -
Cpe01g00994 953 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 335 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe01g00994 953 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 336 953 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe01g00994 953 TIGRFAM kup: potassium uptake protein 335 952 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00089 Cpe01g00994 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00994 Cpe-Chr1:5894275 Cpe03g00553 Cpe-Chr3:3247870 1.25E-172 dispersed
Cpe01g00089 Cpe-Chr1:535107 Cpe01g00994 Cpe-Chr1:5894275 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00994 K03549 - csv:101211022 1181.01