Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01028 ATGTGCGCAGTTGCAGTGCCGACGACAACCACGACGACGATGACCCCATTATTCTCACCTCCAAAAGTTGCTTCACCACTCTACAAGTCGTACTCTCTGAATTATTCTTCTCCTTCTCCTTCTTATTCTTCTTTGCCGAGATCCGTGTCCTGTCCGCCGTCTGCCTCGTCATTGCCTGATGTTGATACTGTTTTGAAGAGGAAGAGGCCGGCGAGAATTGACGTGCCGACGATTGTGCCGTCCATCGGTTTTGGATTTGGAACTTTCGAGACGCCGGAGGTGATGGAGGAGGAAGGAGAAGGATATTCAGTTTATTGTAAAAGAGGAAGAAGACGGAGCGCCATGGAGGATCGATTCTCAGCCACAGTTGGAATTCAAGGAGATTCTCGGCAGGCTTTCTTCGGAATTTTCGATGGACACGGAGGAGCACAAGTGGCGGAAATCGCAGCGAAAAGAATGAGCGAGAATGTAATCGATCAAGTAACGAGAAGAACCGAATCGGAACTCGAGGAAGCAATCAAAGACGGCTATCTGGCGACCGATCGGGAAGTATCGGAGGAAGGAGTCAGCGGCGGCGCCTGTTCCGCCACCGCATTGATTCGGAACGGACATCTCGCAGTCTCGAACGTCGGCGATTGTCGCGCCGTGTTGAGTCGAAAGGGAAAAGCGGAAGCCCTAACCTCCGATCACCGAGCGTGTAGAGAAGACGAGAGAAATCGGATCGAAAAATCGGGCGGTTATGTAGACTGTTGCCGTGGGGCATGGAGAGTTCAAGGAACACTGGCTGTATCTCGAGCCATTGGAGACAAGCATCTGAAACAGTGGGTGATATCAGAGCCGGAGACGAGAGTAGTGAAGATCGAGGATGATTGCGATTACTTGATCCTTGCTTCTGATGGTCTTTGGGACAAGATTACGAATCAGGAAGCAGTAGACGTAGTGGAGGCAGCGTGCGGCGTGGAGATCATGGAGAATAAAAAACCAAATCCGCTATTAATGTCGGCCTGCAAACAGTTGGCGGCCTTGTCAGCATCAAGAGGCTCAGTCGACGATACCACTGTTATGATCATCAAATTAAATTGCCTTCATTTGAACTAA 1098 50.27 MCAVAVPTTTTTTMTPLFSPPKVASPLYKSYSLNYSSPSPSYSSLPRSVSCPPSASSLPDVDTVLKRKRPARIDVPTIVPSIGFGFGTFETPEVMEEEGEGYSVYCKRGRRRSAMEDRFSATVGIQGDSRQAFFGIFDGHGGAQVAEIAAKRMSENVIDQVTRRTESELEEAIKDGYLATDREVSEEGVSGGACSATALIRNGHLAVSNVGDCRAVLSRKGKAEALTSDHRACREDERNRIEKSGGYVDCCRGAWRVQGTLAVSRAIGDKHLKQWVISEPETRVVKIEDDCDYLILASDGLWDKITNQEAVDVVEAACGVEIMENKKPNPLLMSACKQLAALSASRGSVDDTTVMIIKLNCLHLN 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6082343 6084066 - Cp4.1LG01g11420.1 Cpe01g01028 462341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01028 365 ProSiteProfiles PPM-type phosphatase domain profile. 101 359 IPR001932 -
Cpe01g01028 365 PANTHER PROTEIN PHOSPHATASE 2C 36 360 IPR015655 GO:0004722|GO:0006470
Cpe01g01028 365 Gene3D - 92 361 IPR036457 -
Cpe01g01028 365 SUPERFAMILY PP2C-like 101 360 IPR036457 -
Cpe01g01028 365 CDD PP2Cc 101 359 IPR001932 -
Cpe01g01028 365 SMART PP2C_4 92 357 IPR001932 -
Cpe01g01028 365 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN-RELATED 36 360 - -
Cpe01g01028 365 ProSitePatterns PPM-type phosphatase domain signature. 133 141 IPR000222 GO:0043169
Cpe01g01028 365 Pfam Protein phosphatase 2C 107 351 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00122 Cpe01g01028 CCT
Cpe01g00122 Cpe01g01028 ECH
Cpe01g01028 Cpe01g00122 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01028 Cpe-Chr1:6082343 Cpe07g00028 Cpe-Chr7:147992 5.57E-72 dispersed
Cpe13g01170 Cpe-Chr13:9244405 Cpe01g01028 Cpe-Chr1:6082343 7.22E-91 transposed
Cpe01g00122 Cpe-Chr1:697885 Cpe01g01028 Cpe-Chr1:6082343 0 wgd
Cpe01g01028 Cpe-Chr1:6082343 Cpe02g01187 Cpe-Chr2:10796079 2.73E-117 wgd
Cpe01g01028 Cpe-Chr1:6082343 Cpe20g00876 Cpe-Chr20:7869092 7.23E-95 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01028 K17506 - csv:101208170 502.286