Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01044 ATGGCCTTTTTCTTTTTTCTCCTCTTCTTTTCCTCTGTTTTCGCCTCTTCTCTCTTTCTCTTTCTCTTTCTCCGCCCGGCGAGATTCCGGCGTGTCAGGCTGCCACCGGGGACACTCGGCCTCCCCTTCATCGGTGAGTCTCTTCAACTCATCTCCGCTTACAAGACCGAGAACCCCGAACCCTTCATCGACGAGCGTGTCCGACGATTCGGACCGGTTTTTACAACCCACGTGTTTGGAGAGCCGACGGTTTTCTCCGCGGATTGGGAGACGAACCGGTTCATTCTCCAGAATGAGGAGAAGCTTTTCGAGTGCAGCTACCCGGGTTCGATTTCCAACCTGCTTGGGAAGCACTCTTTGTTGGTGATGAAAGGGAGTTTACATAAGAGAATGCATTCTTTGACTATGAGCTTCGGGAATTCTTCCATTATTAGGGATCATCTTTTGGTCGATGTGGACCGGTTGATTCGCCTCAATTTGGAGTCTTGGACCGGCAGGATCTTCCTCATGGAGGAGGCTAAGAAGATAACGTTTGAGTTAGCAGTGAAGCAATTGATGAGCTTTGATCGGTGTGAATGGACTCAAAATCTGATGAAAGAATACCTTCTTGTCATCGAAGGCTTTTTTACCGTCCCTTTCCCTCTCTTCTCCTCTACTTACCGTCGAGCCATCCAGGCACGTGAGAAAGTGGCGGAGCAATTGGGGACGGTGGTGCGGCAGCGGAGGAAAGAGACCAAGGAGGGAGAGAGGAAGAAGGACATGCTTGGAGCTCTCCTCGCCGGAGAAGACGCCCTCTCCGACGACCAAATAGTCGATTTCTTATTGGCTCTACTGGTCGCTGGATATGAAACCACGTCAACCACCATGACCCTCGCCGTCAAGTTTCTCACGGAGACGCCGCTGGCTTTGGCCCAATTACAGGAAGAGCACCACCAAATCAAAGCAAGGAACAAGCAATCACACCAACACCTTCAATGGAATGATTACAAGTCCATGCCTTTCACCCAATGTGTTGTCAATGAAACATTACGAGTTGCCAACATCATCAGTGGCGTGTTTAGGAGGGCAATCACCGACGTAAATATCAAAGGCTACACAATTCCAAAGGGATGGAAGGTTTTTGCATCATTTCGTGCAGTACATTTGGACCATGATCACTTCAAAGATGCTCGCTCTTTTAACCCATGGAGATGGCAAAAGACTAGTTCCGGCTCCACCACGCTTAATGCTTTTACGCCCTTCGGAGGAGGTCCCAGACTATGCCCTGGTTATGAGCTTGCCAGAGTCGAGCTCTCTGTCTTCCTTCATCATCTCGTCACTCAATTCAGTTGGGTTCCGGCAGAGGATGATAAGTTGGTATTTTTCCCAACAACAAGAACACAGAAGCGCTATCCAATCTATGTGACGCGGAAGAAAGACACTACACACTCATCCACCACACACGTCAAGGGAGGCGAGGCGAGTCGAGTCGAGTCAGGTTTCAATATGTAG 1491 49.56 MAFFFFLLFFSSVFASSLFLFLFLRPARFRRVRLPPGTLGLPFIGESLQLISAYKTENPEPFIDERVRRFGPVFTTHVFGEPTVFSADWETNRFILQNEEKLFECSYPGSISNLLGKHSLLVMKGSLHKRMHSLTMSFGNSSIIRDHLLVDVDRLIRLNLESWTGRIFLMEEAKKITFELAVKQLMSFDRCEWTQNLMKEYLLVIEGFFTVPFPLFSSTYRRAIQAREKVAEQLGTVVRQRRKETKEGERKKDMLGALLAGEDALSDDQIVDFLLALLVAGYETTSTTMTLAVKFLTETPLALAQLQEEHHQIKARNKQSHQHLQWNDYKSMPFTQCVVNETLRVANIISGVFRRAITDVNIKGYTIPKGWKVFASFRAVHLDHDHFKDARSFNPWRWQKTSSGSTTLNAFTPFGGGPRLCPGYELARVELSVFLHHLVTQFSWVPAEDDKLVFFPTTRTQKRYPIYVTRKKDTTHSSTTHVKGGEASRVESGFNM 496
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6174460 6179275 - Cp4.1LG01g11290.1 Cpe01g01044 462357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01044 496 SUPERFAMILY Cytochrome P450 28 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g01044 496 Pfam Cytochrome P450 209 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g01044 496 PANTHER CYTOCHROME P450 26 12 470 - -
Cpe01g01044 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Cpe01g01044 496 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g01044 496 PRINTS E-class P450 group I signature 269 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g01044 496 PRINTS E-class P450 group I signature 289 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g01044 496 PRINTS E-class P450 group I signature 336 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g01044 496 PRINTS E-class P450 group I signature 376 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g01044 496 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g01044 496 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g01044 496 Coils Coil 303 323 - -
Cpe01g01044 496 Gene3D Cytochrome P450 24 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g01044 496 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g01044 496 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g01044 496 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g01044 496 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe01g01044 496 MobiDBLite consensus disorder prediction 475 496 - -
Cpe01g01044 496 PANTHER CYTOCHROME P450 90A1 12 470 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00136 Cpe01g01044 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01044 Cpe-Chr1:6174460 Cpe12g00626 Cpe-Chr12:6167313 6.17E-96 dispersed
Cpe01g02317 Cpe-Chr1:19515974 Cpe01g01044 Cpe-Chr1:6174460 2.36E-51 dispersed
Cpe13g00987 Cpe-Chr13:8165137 Cpe01g01044 Cpe-Chr1:6174460 2.35E-83 dispersed
Cpe15g00489 Cpe-Chr15:5867774 Cpe01g01044 Cpe-Chr1:6174460 1.83E-40 dispersed
Cpe17g00090 Cpe-Chr17:520332 Cpe01g01044 Cpe-Chr1:6174460 4.77E-53 dispersed
Cpe17g00952 Cpe-Chr17:7297890 Cpe01g01044 Cpe-Chr1:6174460 2.19E-70 dispersed
Cpe19g00830 Cpe-Chr19:6188942 Cpe01g01044 Cpe-Chr1:6174460 4.36E-78 dispersed
Cpe01g00665 Cpe-Chr1:3887712 Cpe01g01044 Cpe-Chr1:6174460 5.66E-103 transposed
Cpe06g00761 Cpe-Chr6:4810835 Cpe01g01044 Cpe-Chr1:6174460 2.53E-61 transposed
Cpe01g00136 Cpe-Chr1:789194 Cpe01g01044 Cpe-Chr1:6174460 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01044 K09588 - csv:101216594 843.573