Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe01g01050 | ATGGAGGGAAAGGAGGAAGATGTCCGATTGGGAGCCAACAGGTTCACTGAGAGGCAGCCGATTGGGACAGCAGCACAGAGCCAAGACGACGGCAAGGACTACCAAGAGCCTCCACCGGCGCCTCTGTTCGAGCCGGACGAGCTCACTTCATGGTCCTTCTACAGAGCCGGAATCGCCGAGTTTTTAGCCACTTTCCTCTTCCTCTACATCACTGTTTTGACCGTCATGGGCGTCGTCCGCTCCAACGAAATCAACGGCAATACCTGTAAGACTGTCGGGATTCAGGGGATTGCTTGGGCTTTTGGTGGTATGATTTTTGCTCTGGTTTACTGTACCGCTGGAATCTCTGGTGGCCACATTAACCCGGCGTGGATTTTCTGGGTGGGACCATTCATCGGAGCAGCATTGGCAGCTTTATACCATCAAGTGGTGATCAGAGCCATTCCCTTCAAATCCAAGTGA | 462 | 53.03 | MEGKEEDVRLGANRFTERQPIGTAAQSQDDGKDYQEPPPAPLFEPDELTSWSFYRAGIAEFLATFLFLYITVLTVMGVVRSNEINGNTCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAWIFWVGPFIGAALAALYHQVVIRAIPFKSK | 153 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 6199962 | 6201214 | - | Cp4.1LG01g11050.1 | Cpe01g01050 | 462363 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe01g01050 | 153 | SUPERFAMILY | Aquaporin-like | 47 | 123 | IPR023271 | - | |
Cpe01g01050 | 153 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 1 | 123 | IPR034294 | - | |
Cpe01g01050 | 153 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 124 | 153 | IPR034294 | - | |
Cpe01g01050 | 153 | PRINTS | Major intrinsic protein family signature | 101 | 125 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe01g01050 | 153 | PRINTS | Major intrinsic protein family signature | 55 | 74 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe01g01050 | 153 | SUPERFAMILY | Aquaporin-like | 124 | 146 | IPR023271 | - | |
Cpe01g01050 | 153 | PANTHER | MAJOR INTRINSIC PROTEIN, AQUAPORIN-LIKE PROTEIN-RELATED | 124 | 153 | - | - | |
Cpe01g01050 | 153 | PANTHER | MAJOR INTRINSIC PROTEIN, AQUAPORIN-LIKE PROTEIN-RELATED | 1 | 123 | - | - | |
Cpe01g01050 | 153 | Pfam | Major intrinsic protein | 47 | 123 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe01g01050 | 153 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Cpe01g01050 | 153 | Gene3D | Glycerol uptake facilitator protein. | 40 | 123 | IPR023271 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g01050 | Cpe-Chr1:6199962 | Cpe01g00140 | Cpe-Chr1:810724 | 4.27E-83 | dispersed | |
Cpe01g01049 | Cpe-Chr1:6196921 | Cpe01g01050 | Cpe-Chr1:6199962 | 3.09E-14 | tandem | |
Cpe01g01050 | Cpe-Chr1:6199962 | Cpe01g01051 | Cpe-Chr1:6202540 | 2.79E-14 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe01g01050 | K09872 | - | csv:101214512 | 239.965 |