Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01080 ATGACTGTACTTAACTCTTATGATTCTTCTTCTTCTTCTTCTTCCTCTTCCTCTTCCTCTTCCTCTTCTTGTGGCGCCTGCAAGTTTCTAAGGCGAAAATGCAGCGATCAATGTGTATTTGCTCCTTTGTTCAGCTATGATGAAGCCACTTCCCATTTTGCAGCTGTTCATAAAGTGTTTGGAGCTAGTAATGTGTCCAAGCTTCTGTTGCATCTCCCCATGCATGTGCGCAGCCAGGCTGCTATTACCGTCACTTATGAAGCTCTTGAGCGCATGCGAGATCCCGCCAATGGCTGCGTCTTCCATATCTTCGCGTTGCAGCAAGAGGTGGCCAGCTTGCAGGAGGAGATACAAATTCTGGGGACCCAAATAGCCAACTTCCTCACCACCGGCGCTGCCATTTCAGCAGTGGAGAATCCATTTATAGAGATGAATGATTATGATTTTGGGATGAACTCAAACCATTCTCAAAATCAGCTGCTTCCCTACCAAACTTCTGATGGTGTCCAAAAGGATGATCAAATGATATCTCCATTGCTTTGTTTAGGGGAAAAAGATGGAGGCTTTGGGTTCTGCCACTCGAATCATGTTGTTGAGAGATCAGGCTTTGATGTTTCAGTTGAGGAGAATTTTGGTGGCTATCCATGGATACTTGGATGA 660 45.3 MTVLNSYDSSSSSSSSSSSSSSSCGACKFLRRKCSDQCVFAPLFSYDEATSHFAAVHKVFGASNVSKLLLHLPMHVRSQAAITVTYEALERMRDPANGCVFHIFALQQEVASLQEEIQILGTQIANFLTTGAAISAVENPFIEMNDYDFGMNSNHSQNQLLPYQTSDGVQKDDQMISPLLCLGEKDGGFGFCHSNHVVERSGFDVSVEENFGGYPWILG 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6370029 6370760 - Cp4.1LG01g10860.1 Cpe01g01080 462393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01080 219 PANTHER LOB DOMAIN CONTAINING PROTEIN 20 162 - -
Cpe01g01080 219 MobiDBLite consensus disorder prediction 1 23 - -
Cpe01g01080 219 ProSiteProfiles LOB domain profile. 22 124 IPR004883 -
Cpe01g01080 219 Coils Coil 103 123 - -
Cpe01g01080 219 Pfam Lateral organ boundaries (LOB) domain 23 119 IPR004883 -
Cpe01g01080 219 PANTHER LOB DOMAIN-CONTAINING PROTEIN 33 20 162 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00170 Cpe01g01080 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01080 Cpe-Chr1:6370029 Cpe17g00315 Cpe-Chr17:2137602 3.96E-44 dispersed
Cpe01g00170 Cpe-Chr1:957353 Cpe01g01080 Cpe-Chr1:6370029 9.94E-89 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
48817 PF03195 LOB 5.00E-32 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01080 K13945 - csv:101204875 300.056