Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01103 GTCCATGATCGGATATGCACCTCGAGGTTTGTAGGGTTTTTGCATCCCTCAAAGTCAAAGCCATATTTGGGAGTGGTTTTTGTGCAGCTTGGCTATGCTGGAATGACCATTCTTGCTAAGACAGCTTTGGACAAAGGGATGAGCCAATATGTTTTTGTGGCTTATCGTCAAATTGTTGCTACCATTGTCTTTGTTCCTTTTGCTATCATCTTTGACAGGAAAGTGAGGACAAAAATGACGTTTTCGTTGTTCTTCAAGATTGTGATGCTCGGTTTATTAGAGCCGGTAGTGGATCAGAACTTGTTCTATGCTGGTATGAAGCTCACAACAGCAACCTTTGCAGCTGCGTTGTGCAATGTTCTTCCAGCTTTTGCGTTCCTCATGGCTTGGGCTTGCAGGCTTGAGAAAGTGAACATTTTGAAAAGGGGAAGCCAAGCAAAAATCATAGGAACCATAGTGACAGTAGGAGGAGCCATGATTATGACCTTCATAACAGGACCCATGTTGAATCTGCCATGGACAAAGCCCTACCAGCCCTCTGTTTCTTCTCCTTCAGCTGATTCTACAAATCACCAAAGCCCAATAAAGGGCTCCCTCATGATTGCCATTGGCTGCATTAGCTGGTCAGCCTTCATCATTCTTCAAGCAATTACATTGAAATGGTACCCAGCCGAGCTGTCGCTTACAGCATTGATATGCTTGGTGGGCAGCATTGGAGACACAGGGGTGGCTTTGGTGATGGAGAGGGGGAGCCCTTCTGCTTGGGCTTTGCACTTAGACACACAGCTTCTGGCTGTGGTTTATGGTGGAGTAATGTGCTCAGGAATAGCTTATTACATTCAAGGAGTGGTGATGCAAACAAAAGGGCCTGTTTTTGTGAGCGCATTCAATCCTCTGAGCTTGATTCTTGTAGCAATCATGAGCTCCTTCATCTTGTGTGAGATCATGCTTTTGGTGTCTGCAAAGCCATATTTAGGGGTCGTTTTTGTGCAGTTCGGGTCGGCTGGAATGGCGATCATTGCGAAGTCAGCTCTCAACAAAGGGATGAGCCAATATGTGTTTGTGTTCTATCGAATGGCTGTTGCTACTATCGTCTTTGCTCCTTTTGCCATTGTCTTTGACAGGAAAGTGAGGACTAAGATGACCCTTCCGTTGTTCTTCAAGATTGTGATGCTCGGTTTATTAGAGCCGGTGATTGATCTGAACTTGTATTTTACTGGTATGAAGTTCACAACAGCAACCTTTGCAGTCGCCATGTGCAATGTTCTACCAGCTTTTGCTTTCCTCATGGCTTGGGCTTGCAGGCTTGAGAAAGTGAATATTTTGAAAAGGGGAAGCCAAGCAAAAATCATAGGAACCATGGTGACAGTAGGAGGAGCCATGATTATGACCTTCATAACAGGACCCATGTTGAATCTGCCATGGACAAAGCCCTACCACCCCTCTGCTTCTTCATCTTCTTCTTCAGCTGGTTCTGCAAATCACCAAAGCCCAATCAAGGGCTCCCTTATGATTGCCATTGGCGACATTTCCTGGTCAGCTTTCATCATTCTTCAGATGATTACATTGAAATCGTACCCGGCCGAGCTGTCTCTTACAGCGTTGATTTGCTTGGTGGGTACCATTGGTGGCTGTGGGGTGGCTTTGGTCATGGAGAGGGGGAACCCTTCTGCTTGGGCTGTGCACTTTGATAGACAGCTTCTGGCAGTGGTTTATGCTGGAGTAATGTGTTCAGGGGTAACTTATTATATTCAAGGAGTAGTGATGAAAATAAAAGGGCCTGTTTTTGTCACTGCATTCAATCCTCTGAGCTTGATTCTTGTTGCAATCTTGAGCTCCTTCATCTTGTCTGAGATCATGTTCCTGGGAAGGATTGTTGGAGCAGTGGTGATAATCACAGGGTTGTACCTGGTTTTGTGGGGCAAAAGCAAGGATCAGCTTTTAGTTAAACCAGAATCTGATAAGATATCATCTGGTAAGCAACAAATGACTGCAACAACGGGTGAGGAGGGCTCGAAGTCCGTTCAATCGAGTCAAGAGTTCACAGCGCTTGATGTTGGCAAAGAGGACACAAAATGA 2079 45.45 VHDRICTSRFVGFLHPSKSKPYLGVVFVQLGYAGMTILAKTALDKGMSQYVFVAYRQIVATIVFVPFAIIFDRKVRTKMTFSLFFKIVMLGLLEPVVDQNLFYAGMKLTTATFAAALCNVLPAFAFLMAWACRLEKVNILKRGSQAKIIGTIVTVGGAMIMTFITGPMLNLPWTKPYQPSVSSPSADSTNHQSPIKGSLMIAIGCISWSAFIILQAITLKWYPAELSLTALICLVGSIGDTGVALVMERGSPSAWALHLDTQLLAVVYGGVMCSGIAYYIQGVVMQTKGPVFVSAFNPLSLILVAIMSSFILCEIMLLVSAKPYLGVVFVQFGSAGMAIIAKSALNKGMSQYVFVFYRMAVATIVFAPFAIVFDRKVRTKMTLPLFFKIVMLGLLEPVIDLNLYFTGMKFTTATFAVAMCNVLPAFAFLMAWACRLEKVNILKRGSQAKIIGTMVTVGGAMIMTFITGPMLNLPWTKPYHPSASSSSSSAGSANHQSPIKGSLMIAIGDISWSAFIILQMITLKSYPAELSLTALICLVGTIGGCGVALVMERGNPSAWAVHFDRQLLAVVYAGVMCSGVTYYIQGVVMKIKGPVFVTAFNPLSLILVAILSSFILSEIMFLGRIVGAVVIITGLYLVLWGKSKDQLLVKPESDKISSGKQQMTATTGEEGSKSVQSSQEFTALDVGKEDTK 692
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6513013 6523408 + Cp4.1LG01g10680.1 Cpe01g01103 462416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01103 692 SUPERFAMILY Multidrug resistance efflux transporter EmrE 559 643 - -
Cpe01g01103 692 Pfam EamA-like transporter family 324 463 IPR000620 GO:0016020|GO:0016021
Cpe01g01103 692 Pfam EamA-like transporter family 22 162 IPR000620 GO:0016020|GO:0016021
Cpe01g01103 692 Pfam EamA-like transporter family 196 315 IPR000620 GO:0016020|GO:0016021
Cpe01g01103 692 Pfam EamA-like transporter family 500 639 IPR000620 GO:0016020|GO:0016021
Cpe01g01103 692 PANTHER WAT1-RELATED PROTEIN 321 652 IPR030184 GO:0016021|GO:0022857
Cpe01g01103 692 PANTHER WAT1-RELATED PROTEIN 17 318 IPR030184 GO:0016021|GO:0022857
Cpe01g01103 692 PANTHER WAT1-RELATED PROTEIN 321 652 - -
Cpe01g01103 692 SUPERFAMILY Multidrug resistance efflux transporter EmrE 357 464 - -
Cpe01g01103 692 MobiDBLite consensus disorder prediction 653 692 - -
Cpe01g01103 692 SUPERFAMILY Multidrug resistance efflux transporter EmrE 55 162 - -
Cpe01g01103 692 PANTHER WAT1-RELATED PROTEIN 17 318 - -
Cpe01g01103 692 MobiDBLite consensus disorder prediction 655 684 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00192 Cpe01g01103 CCT
Cpe01g01103 Cpe13g00840 CCT
Cpe01g01103 Cpe13g00840 ECH
Cpe01g01103 Cpe01g00192 ECH
Cpe01g00192 Cpe01g01103 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01103 Cpe-Chr1:6513013 Cpe01g02280 Cpe-Chr1:19291497 1.04E-87 dispersed
Cpe04g00563 Cpe-Chr4:6062359 Cpe01g01103 Cpe-Chr1:6513013 1.53E-55 dispersed
Cpe01g01576 Cpe-Chr1:9593628 Cpe01g01103 Cpe-Chr1:6513013 5.65E-45 transposed
Cpe01g00192 Cpe-Chr1:1083179 Cpe01g01103 Cpe-Chr1:6513013 0 wgd
Cpe01g01103 Cpe-Chr1:6513013 Cpe10g00870 Cpe-Chr10:4902433 6.54E-124 wgd
Cpe01g01103 Cpe-Chr1:6513013 Cpe13g00840 Cpe-Chr13:7414496 1.22E-112 wgd
Cpe01g01103 Cpe-Chr1:6513013 Cpe19g00374 Cpe-Chr19:3365005 2.34E-123 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01103 - - csv:101206072 570.852