Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01104 ATGATAGTTGTGAAATTTCGGAGGTTTCAGTCTCTCATTGTTGGTTTCTTTGATTTTGATCGATTGATTTTCGAAATCTTTGAGGTTTGCGCTTTCCGTGGTTCTTTGTTGTGTTTTTCATCGTCTTTCCAGCATAAAAGCTTTTGGATACCAAGGGATGCTGGATGTTTAACTGATGGAGAGATGAACTATGATAGCTCCTCCAGAATCGAAGCCAAACGTGGCCATCAATGGTTCATGGATGGCAGTGCACCAGAGCTATTCAGTAGCAAGAAGCAAGCAATAGAAACCGTAAATACTAGACCTGTTCCAGGAGTTCCACACATGAATGTTTCTCCCTGGGAAAACACTTCAAGTTTTCAGTCAGTTCCTGGGCACTTCACTGATCGTCTTTTCGGCTCTGAGCCAGTACGAACTGTCAACTTGGTCGATAGAGGCATCACTGTTGGAAATGCAAATATGGACATGGGAAGAAAGGAGTATGAGAATCATTTTGCAAACAACCCATCCGTTGGCTTGTCCATGTCCCAATCCATTGAGGATTCCTCATCGTGCCTCAATTTTGGTGGAATTAGAAAAGTTAAAGTCAATCAAGTCAGGGATCCTGACATTGGCATGCCTGCCTCTTTGGGACATGCCTATAGTAGGGGTGATAATGGTACAATTTCAATGGGTACAACATTTAACAAAAACCACGAGCACGCCATTTCATTGGGCCATACATATAATAGTCGAGATGAGAATGCCATCTCGGTTGGCCCTGCATATCACAAGACAGACGACAGTTTCATTTCCATGGGTCATGCTTTCAGCAAAGGTGATGAGAATTTTATTACAATTGGTCCTAACTATAGCAAGGGAGATAATAGCATCCTATCGATGAGCCAGCCTTTTGACAAAGGGGATGACTCTTTTATTTCAATGGGTCAATCTTATGAGAAGGCAGAAGGTAATATCATTTCTTTTGGTGCCTCCTACAATAAAGGGCATGAAAATTTTATCTCAATGGGGCCAACCTATAGTAAGGCAGGTGATACTTTCATTTCAATGGCGCCCTCCTATAATAAGGGAAATGATGATAACTTGTCCATGGGTCCAACCTTTGACAAGGTAAACTCGGACGTTGTACATGTCGGTCCTAAATTTGACAAAGCCGATTCTGGTTCGGTGTCAATGACTCACAACTATCATAAAGGTGAGACTAATACCATATCTTTTGGAGGCTTTGATGATGAGAATGGGACAGGTAATCCTTCTGGTGGGATCATTAGCAGTTATGACTTGTTAATGGCGAATCAGGCTTCTGCCCAAGCATCAGAAGTATCAACCATGAGAGATTCAGTTCATCCCAATGTGGAAGTGAACATTAACAATGTCATAAAAGTTGATGCTAAAATCGACACAAGTTCCAAGATTAGAGAGCCGAGGACGACTAAGAAGGTGTCACCCAATAGCTTCCCTTCAAATGTTAAAAGCTTGCTCTCAACTGGTATGCTTGATGGGGTTCCTGTGAAATATGTTTCTTGGTCACGGGAGTCTTTTCTGCCACCTGTTTCAAATATTTATACTGGGAAGAAAAATCTGAAAGGAACAATAAAAGGAACTGGATACTTGTGCAGCTGTGACAACTGCAATCATTCAAAGGCTCTCAATGCTTATGAGTTTGAGAGGCACGCTGGCTGCAAAACCAAACATCCAAATAACCACATTTACTTTGAGAATGGTAAAACTATCTATGCTGTTGTTCAAGAGCTAAAGAACACCCCTCAGGAGATGTTATTTGATGCAATTCACAATGTGACTGGCTCTCCCATTAATCAGAAGAACTTTCGTGTTTGGAAAGCATCTTATCAAGCAGCCACTCTTGAACTCCAGCGTATTTATGGAAAAGATGAAATAACTATGCCTTCTTGA 1914 41.43 MIVVKFRRFQSLIVGFFDFDRLIFEIFEVCAFRGSLLCFSSSFQHKSFWIPRDAGCLTDGEMNYDSSSRIEAKRGHQWFMDGSAPELFSSKKQAIETVNTRPVPGVPHMNVSPWENTSSFQSVPGHFTDRLFGSEPVRTVNLVDRGITVGNANMDMGRKEYENHFANNPSVGLSMSQSIEDSSSCLNFGGIRKVKVNQVRDPDIGMPASLGHAYSRGDNGTISMGTTFNKNHEHAISLGHTYNSRDENAISVGPAYHKTDDSFISMGHAFSKGDENFITIGPNYSKGDNSILSMSQPFDKGDDSFISMGQSYEKAEGNIISFGASYNKGHENFISMGPTYSKAGDTFISMAPSYNKGNDDNLSMGPTFDKVNSDVVHVGPKFDKADSGSVSMTHNYHKGETNTISFGGFDDENGTGNPSGGIISSYDLLMANQASAQASEVSTMRDSVHPNVEVNINNVIKVDAKIDTSSKIREPRTTKKVSPNSFPSNVKSLLSTGMLDGVPVKYVSWSRESFLPPVSNIYTGKKNLKGTIKGTGYLCSCDNCNHSKALNAYEFERHAGCKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFDAIHNVTGSPINQKNFRVWKASYQAATLELQRIYGKDEITMPS 637
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6521592 6527535 - Cp4.1LG01g10540.1 Cpe01g01104 462417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01104 637 Pfam Tify domain binding domain 530 585 IPR032308 -
Cpe01g01104 637 PANTHER AUTOIMMUNE REGULATOR 44 637 - -
Cpe01g01104 637 PANTHER N-LYSINE METHYLTRANSFERASE 44 637 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00193 Cpe01g01104 CCT
Cpe01g00193 Cpe01g01104 ECH
Cpe01g01104 Cpe01g00193 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01104 Cpe-Chr1:6521592 Cpe09g00545 Cpe-Chr9:3661149 8.66E-17 dispersed
Cpe01g00193 Cpe-Chr1:1091374 Cpe01g01104 Cpe-Chr1:6521592 0 wgd
Cpe01g01104 Cpe-Chr1:6521592 Cpe16g00590 Cpe-Chr16:6625512 1.54E-42 wgd
Cpe01g01104 Cpe-Chr1:6521592 Cpe03g00132 Cpe-Chr3:661351 1.43E-38 wgd
Cpe01g01104 Cpe-Chr1:6521592 Cpe05g00901 Cpe-Chr5:5948305 2.02E-07 wgd
Cpe01g01104 Cpe-Chr1:6521592 Cpe08g01153 Cpe-Chr8:8575977 2.27E-38 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01104 - - csv:101206313 1077.77