Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe01g01110 | ATGATTATTGTCTGTGGATTTTGGACGGGCATGGTGGGCTCCGAGGACTCTGGTACTTCTGGGGCCGCAGTGCAGCTCTCTGGCAATCGGAAATTGTTCTGGCGCTCGGCTTCGTGGTCTGCATCACGTTCCTCCCTTCACCACCCGGAAGTGAACAGAGAAGGTGGAGACCCCAATGGGAATCTTGGTGATAGCAGTGGACCAAGCCGAATTTTCCCTGCCCCATTAACTCCAAGGTCGCAGCAGCATTGCAAAGCGAGGTCGTGTTTGCCTCCTTTACAACCTTTGTCCATAGCTCGGCGAAGCTTAGATGAATGGCCGAAGGCGGGATCGGATGATATTGGTGAGTGGCCGCAGCCTCCTACACCAAGTGGCAGAGGAAATTGCGAGAGGTTGAAACTTGATTTGTCGACAATTCAGAGAAACCCGGATAAGAATTGTGGGCTGGTGAAGAGGGATAAGATTGCTTTCTTTGACAAAGAGTGTTCAAAGGTGGCTGAACATGTATATCTTGGTGGTGATGCGGTTGCTCGAGATAGGGATATACTTAAACAGAATGGAATTACTCATGTGTTGAATTGTGTAGGTTTCGTTTGCCCTGAGTACTTCAAAGATGATTTCGTGTACAGAACTTTGTGGTTGCAGGATAGCCCTTCTGAGGATATTACCAGTATACTTTATGATGTTTTTGACTACTTTGAAGATGTTAGAGAACAAAATGGAAGGGTTTTTGTTCATTGTTGCCAGGGAGTATCGCGGTCGACGTCGTTGGTGATTGCCTATCTTATGTGGAGAGAAGGGCAGAGTTTTGATGATGCATTTCAATATGTAAAGGCAGCAAGAGGTATTGCTGACCCCAATATGGGTTTTGCTTGCCAGTTATTACAATGCCAAAAGAGGGTCCATGCTTTCCCTCTTAGCCCAAGTTCACTGTTGAGGATGTACAGAGTTGCTCCACACTCGCCATATGATCCTTTGCATTTGGTCCCCAAAATGTTAAATGATCCTTCTACCTCATCTCTGGATTCTAGAGGTGCATTTATCATTCATGTACCCTCTGCCATATTTGTTTGGATTGGTAAGAACTGTGAAGCAATCATGGAAAGAGATGCGAGGGGAGCTGTTGTGCAAATCGTTCGATATGAGAAGGTGCATGGGCCTATTTATGTAATTAAAGAAGGGGAAGAACCAGCCAACTTTTGGGACTCTTTTGCAAACCTGTTACCTTTAATGGATAAATCTAACAGTAAAATTAATCTTGGGGAATTAAGAGCTAAGCCTTATCCAGGGGAGAGGAGAGTTGATTCCTATGATTTAGATTTTGAAATTTTCCAGAAGGCTATTACTGGTGGTTTCGTTCCTCCATTTCCTTCATCTGAGAATGAGCATGAAACCCATCTTCCTGTCAGAGAAAGCAGTTGGAGTATGCTTAGGCGTAAGTTTGCCTCTGGAAATATGAGAGAGTTTGTATCAGCTCCACGGATATCGCTCTCTAGGGTCTATTCTGACTCGTTGATGATGGTGCATTTTTCTGCAAAACCTTCATCGCCTTCAGCAATTTCTTTGTCTTCGTCATCTTCTTCGCCTATCCATCTTTCGCCAGACTCCCTTTCTTCTGATTCAAGTTCAAGTTCAAGTTCAAGTTCAAGTACCAATTCCTTAGAATCGATGCCCGATGGTCCAGAAACTCGTGATGCAGTCCCTTTGGAATCAAGTTCTCGGTCATTCTCATTCCCATCCAAAAAGTTCTCACCTTCTCTTGCAGAACGCCGAGGTAGTGCAAAATCTCTGACATTGCCTACAATGCCTTGTAAAATCAGAGCAACAAATAGTGCCTCAAGGTTTCTTGCCACTCAAGAAGATGGTAAGAGGAAAAACAAGATTTCTTTCTCTCTTGATGCATCATTTAATATGAAAAAGGGCTCAGAGCCTATGGATAATGTTGAAGATGAACAAACAAGTTCCACTCAGAATTTCAAGAATATCGAAAATGGAATGGATGTACGGGTAGGTTGCATGGCCACGAGCCAGGTCGAAACTGAAGTTGCTGGACAATCAGCTGGTTCATGGAAAAGCTATCCAAAACATTTTGAAGAAGGCATGGTATCCAGTGTGTCAAATGGGAAGCAAGATGGTGAGTTTGTCCAACCAATGGTATACTGTTGGCCGGAGTTAGCAAAGATTGCAGCTTTTGACACAAGTTACCTTCATTCTAAAGCTGCCGTAGTGATTTTCTCTCCAAGTAGGTATTTAGGCAAGAAGGATGACATGATGCTGTATATTTGGGTAGGAAATTCTTTTGACCATGATTTATCTCCGATTCAAGTAAAGAGGGACAAAGACTTGGTTGATGTAGAAAAGATAGACTGGGTTAAAGTTGGCCAATATGTGCTTACTGAAATAGGTCTGCCAGAAAATACAGAAATTAAGATCGTTAAAGAAGGTGAAGAAACAGAGGAATTTCTTGCACGATTGAGTCTTTTGTAG | 2487 | 43.31 | MIIVCGFWTGMVGSEDSGTSGAAVQLSGNRKLFWRSASWSASRSSLHHPEVNREGGDPNGNLGDSSGPSRIFPAPLTPRSQQHCKARSCLPPLQPLSIARRSLDEWPKAGSDDIGEWPQPPTPSGRGNCERLKLDLSTIQRNPDKNCGLVKRDKIAFFDKECSKVAEHVYLGGDAVARDRDILKQNGITHVLNCVGFVCPEYFKDDFVYRTLWLQDSPSEDITSILYDVFDYFEDVREQNGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRVAPHSPYDPLHLVPKMLNDPSTSSLDSRGAFIIHVPSAIFVWIGKNCEAIMERDARGAVVQIVRYEKVHGPIYVIKEGEEPANFWDSFANLLPLMDKSNSKINLGELRAKPYPGERRVDSYDLDFEIFQKAITGGFVPPFPSSENEHETHLPVRESSWSMLRRKFASGNMREFVSAPRISLSRVYSDSLMMVHFSAKPSSPSAISLSSSSSSPIHLSPDSLSSDSSSSSSSSSSTNSLESMPDGPETRDAVPLESSSRSFSFPSKKFSPSLAERRGSAKSLTLPTMPCKIRATNSASRFLATQEDGKRKNKISFSLDASFNMKKGSEPMDNVEDEQTSSTQNFKNIENGMDVRVGCMATSQVETEVAGQSAGSWKSYPKHFEEGMVSSVSNGKQDGEFVQPMVYCWPELAKIAAFDTSYLHSKAAVVIFSPSRYLGKKDDMMLYIWVGNSFDHDLSPIQVKRDKDLVDVEKIDWVKVGQYVLTEIGLPENTEIKIVKEGEETEEFLARLSLL | 828 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 6560631 | 6565492 | - | Cp4.1LG01g10590.1 | Cpe01g01110 | 462423 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe01g01110 | 828 | MobiDBLite | consensus disorder prediction | 531 | 599 | - | - | |
Cpe01g01110 | 828 | MobiDBLite | consensus disorder prediction | 109 | 128 | - | - | |
Cpe01g01110 | 828 | SUPERFAMILY | Actin depolymerizing proteins | 308 | 409 | - | - | |
Cpe01g01110 | 828 | PANTHER | PROTEIN-TYROSINE-PHOSPHATASE MKP1 | 11 | 822 | - | - | |
Cpe01g01110 | 828 | MobiDBLite | consensus disorder prediction | 568 | 582 | - | - | |
Cpe01g01110 | 828 | Pfam | Gelsolin repeat | 336 | 401 | IPR007123 | - | |
Cpe01g01110 | 828 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 220 | 281 | IPR000387 | GO:0016311|GO:0016791 | |
Cpe01g01110 | 828 | Gene3D | Severin | 312 | 407 | IPR029006 | - | |
Cpe01g01110 | 828 | MobiDBLite | consensus disorder prediction | 531 | 558 | - | - | |
Cpe01g01110 | 828 | SMART | dsp_5 | 161 | 300 | IPR020422 | GO:0006470|GO:0008138 | |
Cpe01g01110 | 828 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 245 | 255 | IPR016130 | GO:0016311|GO:0016791 | |
Cpe01g01110 | 828 | Pfam | Dual specificity phosphatase, catalytic domain | 169 | 299 | IPR000340 | GO:0008138|GO:0016311 | |
Cpe01g01110 | 828 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 161 | 303 | IPR020422 | GO:0006470|GO:0008138 | |
Cpe01g01110 | 828 | MobiDBLite | consensus disorder prediction | 44 | 76 | - | - | |
Cpe01g01110 | 828 | SMART | VILL_6 | 310 | 407 | IPR007122 | GO:0051015 | |
Cpe01g01110 | 828 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 156 | 302 | IPR029021 | - | |
Cpe01g01110 | 828 | PANTHER | MKPA PROTEIN | 11 | 822 | - | - | |
Cpe01g01110 | 828 | Gene3D | Protein tyrosine phosphatase superfamily | 148 | 303 | IPR029021 | - | |
Cpe01g01110 | 828 | CDD | DSP | 162 | 296 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe01g00201 | Cpe01g01110 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g01110 | Cpe-Chr1:6560631 | Cpe01g01575 | Cpe-Chr1:9430635 | 2.55E-12 | dispersed | |
Cpe15g00859 | Cpe-Chr15:8375603 | Cpe01g01110 | Cpe-Chr1:6560631 | 7.56E-13 | transposed | |
Cpe17g00126 | Cpe-Chr17:803684 | Cpe01g01110 | Cpe-Chr1:6560631 | 1.70E-22 | transposed | |
Cpe18g00937 | Cpe-Chr18:8248876 | Cpe01g01110 | Cpe-Chr1:6560631 | 2.65E-20 | transposed | |
Cpe01g00201 | Cpe-Chr1:1131124 | Cpe01g01110 | Cpe-Chr1:6560631 | 5.91E-138 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe01g01110 | - | - | csv:101223210 | 1415.98 |