Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01113 ATGGCCATTGAGGTTGTCGTCAAGGCTGCTACTGGTGCTCCCGATGTTCTTGGAGACTGCCCTTTCTGCCACAGGGTTCTTTTAACTTTAGAGGAGAAGAAAGTTGCTTATAAATTGCTTCTTGTCAATCTCTCCGACAAACCCAGTTGGTTCTTGGAAGTGAGCCCAGAAGGGAAGGTGCCTGTGGTGAAGTTTGATGGCAAATGGGTTCCTGATTCTGATGTCATTGTGGGGATTCTTGAGGACAAGGGATCAAAGATAAACGGTGCTTTTGTAAAATTCTTGTTGAGCAAGGACCCCAGTGATGGTTCAGAGCAGGCTTTGCTTGAAGAGTTGAAGGCGTTGGATGAGCATCTTAAGGCTCATGGTCCTTATGTTGCTGGGCAAAAAGTAACTGCTGTTGATTTGAGTCTGGCACCAAAGCTGTACCATATTGATATTGCTCTTGGCCATTTCAAGAAGTGGTTGCTTTTCGCTCGAGAATCGTTCGTGAAGACGAAGGCTGTCCCAGAACATGTAATTGCTGGTTGGGAGACCAAGGTGAATGCTGCTTGA 555 46.31 MAIEVVVKAATGAPDVLGDCPFCHRVLLTLEEKKVAYKLLLVNLSDKPSWFLEVSPEGKVPVVKFDGKWVPDSDVIVGILEDKGSKINGAFVKFLLSKDPSDGSEQALLEELKALDEHLKAHGPYVAGQKVTAVDLSLAPKLYHIDIALGHFKKWLLFARESFVKTKAVPEHVIAGWETKVNAA 184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6580517 6583972 - Cp4.1LG01g10570.1 Cpe01g01113 462426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01113 184 Pfam Glutathione S-transferase, C-terminal domain 104 151 - -
Cpe01g01113 184 Gene3D Glutaredoxin 1 83 - -
Cpe01g01113 184 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Cpe01g01113 184 SUPERFAMILY Thioredoxin-like 19 83 IPR036249 -
Cpe01g01113 184 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 1 182 - -
Cpe01g01113 184 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 1 182 IPR044627 GO:0033355|GO:0045174|GO:0098869
Cpe01g01113 184 SUPERFAMILY GST C-terminal domain-like 91 180 IPR036282 -
Cpe01g01113 184 Gene3D - 84 183 - -
Cpe01g01113 184 CDD GST_N_family 20 77 - -
Cpe01g01113 184 Pfam Glutathione S-transferase, N-terminal domain 19 83 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01113 Cpe-Chr1:6580517 Cpe03g00710 Cpe-Chr3:4288149 1.65E-76 dispersed
Cpe01g00205 Cpe-Chr1:1155976 Cpe01g01113 Cpe-Chr1:6580517 2.02E-26 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01113 K21888 - cmax:111483829 306.99