Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01118 ATGCACATCAAAGAATTCTTTGGCTTCTCCCATTCCTCTTCCTCAAAATCCCTCCATTCATTTCAGAGCACCGACCGCCGGAAGCCACCGCCGTCGAGCTATGACTCTTCCAAATCAGCGGCCATGGAAGAAGCCATCGTAAACTCCGAACCCATCATCACGAAATGGGACCCGGATTCCTCTGAGTTCAATAGAATCACCTTCCTCTTCCGCCATGGTCGAGCGGAATCTGACGAGTTTGTCAACTCCGTCAACAGCCTCCGGCGAGCGATGGACTTTTTCATTTCGGAAAATTCCACCTCCCCTGTTCTTGTTCTAGCTCAACAATTGATGCAGGCCGCCATGAGACGACTCGAGAAGGAATTTTACCAGATTTTGAGTGAGAATCGCCAGAATTTGGACCCTGAATCTATCTCCAGTAGGTCCTCCGACCGGTCGACGGTTGACGGGGAAACCAGTGATTTGATTACAGAGTTCGATAGAGTGTCGGCGGATTTGAAATCGATTGCTGATTGTATGATCGATTCTGGGTATGGGAAAGAATGCGTTAAAATCTATAAAGTGATACGAAAATCGATCGTTGATGAAACTCTGTACCGCCTTGGAACAGAGAAATTCAAAATTTCGAGAATTATGAGATGGAATTGGGATTCACTCGAGCACGTGATCAAGAATTGGATGAACTCAATTAAGATCGCTGTGAATACTCTGTTTCGTGGCGAGAAAATTCTCTGTGATCATGTTTTTTCGCGATCGGAAATTATCAGAGAGTCCTGTTTTTCCGAGATCACAAAAGATGGTGCAATCGCTTTATTCAGATTCCCGGAATTGATCACAAAAGGGAAGAAAGATTCCGACAAAATCTTTTTGTTAATGGAGCTTTACGAGGCGAATTCCGACGTATTGCCGGAAATTGAAGTGATATTCGACTCTGTTTCTACATCCGCCATTAAAACGCAAGCTCAAACGTCAATGGAGAAACTTGCAGATTCAATCCGCGATATTCTCTCTGAATTTGGGTCGACAATTCAAAAAGATTCGTCGAAAAATCCAGCCCCCGGCGGCGGAATCCACCCACTGACCCGATCGGCAATGAACTACATTTCGTCTCTCGGCGACTACGCCGGAACCCTCTCCGACATACTCACCGCCGAGAACTCTCCAATTCCATCGTCGTACATGGAAACCATCGGTGCAGATGACGCGCTATCATCGCCGGTGGCAGCTCAATTGGGGTGGCTGATTTTAGTCCTCCTCTGCAAACTTGACACAAAAGCAGAGCTGTACAAAGACGTATCGTTGTCGTACCTATTTCTGGCGAACAACCTGAATTTCATCGTGAAGACGGCGGCGACGACGAATTTGAATACGTTGGTAGGCACCGAGTGGGTGACGAACCACAGGAGCAAGGTGAAGGTGTACGCAGCGAAGTACGAAGCGACGGCTTGGAACAGAGTGGTGAATTCGCTGCCGGAAAGTTGGACGGAAGAGACGGCGGCGGAGGGGTTGAAGAGGTTCAATGCGGCGTTTGAAGAGGCGTATCGGAAGCAGATATCGTGGAGAGTGGAGGATGGAAATTTGAGAGATGAATTGAAGACGGCGATAGCGAAGAAGGTGGTGCCGATTTACAGAGAGTTCTACGAGGGGTGTGTTGAGAAGGTGAATGTGGGTGTGGAAAGGAATGATCTTGTGAAAGCTTTTGGTGTGAGATTTTCTCCCGATGATTTGGGGAATTATTTGTCGGATTTGTTCCATGGGGTTTCTCTTTCTTCTTCGCAAAAGGGCTAA 1788 47.37 MHIKEFFGFSHSSSSKSLHSFQSTDRRKPPPSSYDSSKSAAMEEAIVNSEPIITKWDPDSSEFNRITFLFRHGRAESDEFVNSVNSLRRAMDFFISENSTSPVLVLAQQLMQAAMRRLEKEFYQILSENRQNLDPESISSRSSDRSTVDGETSDLITEFDRVSADLKSIADCMIDSGYGKECVKIYKVIRKSIVDETLYRLGTEKFKISRIMRWNWDSLEHVIKNWMNSIKIAVNTLFRGEKILCDHVFSRSEIIRESCFSEITKDGAIALFRFPELITKGKKDSDKIFLLMELYEANSDVLPEIEVIFDSVSTSAIKTQAQTSMEKLADSIRDILSEFGSTIQKDSSKNPAPGGGIHPLTRSAMNYISSLGDYAGTLSDILTAENSPIPSSYMETIGADDALSSPVAAQLGWLILVLLCKLDTKAELYKDVSLSYLFLANNLNFIVKTAATTNLNTLVGTEWVTNHRSKVKVYAAKYEATAWNRVVNSLPESWTEETAAEGLKRFNAAFEEAYRKQISWRVEDGNLRDELKTAIAKKVVPIYREFYEGCVEKVNVGVERNDLVKAFGVRFSPDDLGNYLSDLFHGVSLSSSQKG 595
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6597741 6599528 - Cp4.1LG01g10400.1 Cpe01g01118 462431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01118 595 MobiDBLite consensus disorder prediction 1 40 - -
Cpe01g01118 595 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 13 592 - -
Cpe01g01118 595 SUPERFAMILY Cullin repeat-like 50 585 IPR016159 -
Cpe01g01118 595 MobiDBLite consensus disorder prediction 8 40 - -
Cpe01g01118 595 PANTHER EXOCYST COMPLEX PROTEIN EXO70 13 592 IPR004140 GO:0000145|GO:0006887
Cpe01g01118 595 Gene3D Exocyst complex component Exo70 52 594 - -
Cpe01g01118 595 Pfam Exo70 exocyst complex subunit 224 582 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01118 Cpe-Chr1:6597741 Cpe02g01271 Cpe-Chr2:11374701 2.38E-176 dispersed
Cpe01g00211 Cpe-Chr1:1187564 Cpe01g01118 Cpe-Chr1:6597741 0 wgd
Cpe01g01118 Cpe-Chr1:6597741 Cpe16g00582 Cpe-Chr16:6587972 1.45E-159 wgd
Cpe01g01118 Cpe-Chr1:6597741 Cpe19g00379 Cpe-Chr19:3404478 4.34E-114 wgd
Cpe01g01118 Cpe-Chr1:6597741 Cpe20g00789 Cpe-Chr20:7077959 2.59E-175 wgd
Cpe01g01118 Cpe-Chr1:6597741 Cpe03g00140 Cpe-Chr3:707814 8.90E-175 wgd
Cpe01g01118 Cpe-Chr1:6597741 Cpe05g00891 Cpe-Chr5:5902956 1.80E-178 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01118 K07195 - csv:101221801 959.133