Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01128 ATGGTATCAGAAACTTTGATGAAGATTGTATCACCTTGCTGGAAACCTTCTGTTGAAGGTGAAAATTCCAGCAGAGGTGGGGATGCGAGTGGTCGGGTTGATGGATTGTTATGGTACAAGGATTCTGGCCGCCATATTAATGGGGAATTCTCAATGGCGGTTATTCAGGCAAATAATTTGTTGGAAGATCGTAGCCAACTCGAGTCAGGGCCACTGAGCTCATTTGAATCAGGTCCCATTGGGACGTTCGTTGGAATCTATGATGGCCATGGAGGACCTGAAGCTGCAGAATTCATAAGTGATCGTCTGTTCAATAATATGAAGACTTTTCATGGTGCAGAATTTATTCCAGAAAATCGGGGAGTATCTGCTGAAATTATAAACAAAGCATTCTTGGAGACAGAGGAGGAATTTTTGTCTCTTGTAAAGAAACAATGGCTTAGTAAGCCTCAAATTGCTTCGGTTGGTTCATGCTGTTTGGTAGGCATAATATGTTGTGGATTACTGTATATTGCAAATGCTGGAGATTCTAGAGTGGTGTTGGGAAGATTTGAAAAAACTCATAAAGAGGTTAAAGCCATCCAATTGTCATCTGAGCACAATGCTAGTATTGAATCTGTGCGAGAGGAGTTGCACTCGTTGCATCCCGGTGATCCGCAGATCGTTGTGCTAAAGCACAAGGTGTGGCGCGTGAAGGGTGTTATACAGATAATAGCCTATCTCTCTACATTCGAGTAG 738 42.68 MVSETLMKIVSPCWKPSVEGENSSRGGDASGRVDGLLWYKDSGRHINGEFSMAVIQANNLLEDRSQLESGPLSSFESGPIGTFVGIYDGHGGPEAAEFISDRLFNNMKTFHGAEFIPENRGVSAEIINKAFLETEEEFLSLVKKQWLSKPQIASVGSCCLVGIICCGLLYIANAGDSRVVLGRFEKTHKEVKAIQLSSEHNASIESVREELHSLHPGDPQIVVLKHKVWRVKGVIQIIAYLSTFE 245
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6676303 6680470 + Cp4.1LG01g10510.1 Cpe01g01128 462441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01128 245 CDD PP2Cc 50 237 IPR001932 -
Cpe01g01128 245 ProSiteProfiles PPM-type phosphatase domain profile. 49 245 IPR001932 -
Cpe01g01128 245 PANTHER PROTEIN PHOSPHATASE 2C 38-RELATED 8 237 - -
Cpe01g01128 245 PANTHER ALPHABET, ISOFORM E-RELATED 8 237 - -
Cpe01g01128 245 Gene3D - 39 239 IPR036457 -
Cpe01g01128 245 Pfam Protein phosphatase 2C 82 204 IPR001932 -
Cpe01g01128 245 SMART PP2C_4 41 238 IPR001932 -
Cpe01g01128 245 ProSitePatterns PPM-type phosphatase domain signature. 83 91 IPR000222 GO:0043169
Cpe01g01128 245 SUPERFAMILY PP2C-like 58 237 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00222 Cpe01g01128 CCT
Cpe01g00222 Cpe01g01128 ECH
Cpe01g01128 Cpe01g00222 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01128 Cpe-Chr1:6676303 Cpe10g00688 Cpe-Chr10:3957063 1.67E-105 dispersed
Cpe01g00222 Cpe-Chr1:1248672 Cpe01g01128 Cpe-Chr1:6676303 2.88E-167 wgd
Cpe01g01128 Cpe-Chr1:6676303 Cpe03g00147 Cpe-Chr3:742758 3.72E-106 wgd
Cpe01g01128 Cpe-Chr1:6676303 Cpe08g01134 Cpe-Chr8:8492012 2.04E-104 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01128 K01102 - csv:101220760 449.129