Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01152 ATGTCGAATTCCGATTCTGGCAACACCAATGGAGTCTCCAATGGCGCCGCCATTGATACCCCCAAAAACCAGCCCTCTTCAAATGGGGCCCTCGTCGTTAAAAAGCCTCCCTCCAAGGACCGCCATAGCAAGGTCGATGGTCGTGGTCGCCGCATCCGTATGCCCATCATATGCGCCGCTCGAGTATTCCAGTTGACTCGAGAGCTTGGTCATAAGTCCGATGGCCAGACCATCGAGTGGCTCCTTCGCCAGGCTGAGCCCTCTATTATTGCCGCCACTGGTACCGGCACTACCCCGGCTAATTTCTCCTCCGTCTCTCTTTCCGTCAGAGGAAATGGCGGCTCCACTTCTCTCTCTTCCCCTTCTTCCACCACTTCAACTCTCTCCCTCTCTCGCCCCCAGGCTCTCTCGGGCCCCACGCCGTTTATTCTCGGCAAGCGCGTTAGGTCCGATGACGACGGCGGTAAGGACGATGGGTCGGGAGTGGGTCCGACTGGGCCAGGTGGGTACTGGGCGGTTCCAGCGAGACCCGATTATGGGCAGGTGTGGAGTTTTGCCGCCGCGGCTCCCTCAGAAATGGTGGTTCAACCCGGGGGGATTTCTCAACAAGCGTCGTTGTTTGCCCAACCGCAGCAGCCGATTAGAGAAGCGTCGGCGGCGAGAGTGGGGAATTACCTTCCCAGTCATCTGAATTTACTGGCGTCTTTGTCCGGTGGCGGTGGTTCTGGCCGGCGGGAAGATGACCCTCGCTGA 753 58.83 MSNSDSGNTNGVSNGAAIDTPKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGGKDDGSGVGPTGPGGYWAVPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQPQQPIREASAARVGNYLPSHLNLLASLSGGGGSGRREDDPR 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6847350 6848102 + Cp4.1LG01g10190.1 Cpe01g01152 462465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01152 250 MobiDBLite consensus disorder prediction 110 169 - -
Cpe01g01152 250 ProSiteProfiles TCP domain profile. 38 92 IPR017887 -
Cpe01g01152 250 MobiDBLite consensus disorder prediction 1 31 - -
Cpe01g01152 250 MobiDBLite consensus disorder prediction 110 136 - -
Cpe01g01152 250 MobiDBLite consensus disorder prediction 35 50 - -
Cpe01g01152 250 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 247 IPR005333 GO:0003700
Cpe01g01152 250 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 247 - -
Cpe01g01152 250 MobiDBLite consensus disorder prediction 1 50 - -
Cpe01g01152 250 Pfam TCP family transcription factor 38 124 IPR017887 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01152 Cpe-Chr1:6847350 Cpe13g00517 Cpe-Chr13:5277063 2.82E-54 dispersed
Cpe04g01504 Cpe-Chr4:11883435 Cpe01g01152 Cpe-Chr1:6847350 2.76E-28 dispersed
Cpe05g00807 Cpe-Chr5:4999887 Cpe01g01152 Cpe-Chr1:6847350 7.12E-28 dispersed
Cpe01g01152 Cpe-Chr1:6847350 Cpe01g01952 Cpe-Chr1:16621055 3.74E-39 wgd
Cpe01g01152 Cpe-Chr1:6847350 Cpe19g00421 Cpe-Chr19:3820926 2.49E-33 wgd
Cpe01g01152 Cpe-Chr1:6847350 Cpe09g00495 Cpe-Chr9:3289850 3.63E-105 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
48823 PF03634 TCP 3.50E-33 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01152 K16221 - csv:101206050 380.948