Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe01g01154 | ATGTCTCGGAAATCCCAGGTGATGCCTTCATTGCAAGCTACGAAATCCATGCCAGTTAATTCTCGGTTCATGATTCCGCAAACTGCTGAAACTTTGGAAGAGCCTTATAATCAGAATGTGAAAAACATGGAAGGTAGATCGATAGTTGATGGCGAAAATGGTGTTGCCAGAGATGATGGCGTCAATCGACTTCAATACAGTATGAACAATATTGATGAGCTGAATGAGGACTCACCATATATTTACAATATTACAACAGTGGAAGAAAGACCCATCGTGGATGATGGAGAAGATGGTTTTATGCCTTTACCTTCACCTTCAATGTCGGCTTCACAGAGTGAACGCAGGTGGGGTGACACATCCTCCTACACGCCAAGGAAGATACTCAAGTCTTGGTTTAAACTTCCAAATGGAAACTGGGATCTTGTAAAGATACTGTCAACGGCGGGAACAGAGTCAGTTGTTTCACTGACTGATGGAAAGGTGTTAAAGGTGAAAGCTGAAGATTTGATTCCTGCAAATCCGGATATCCTTGATGGCGTTGATGATCTTATGCAACTTAGCTATTTAAATGAGCCTTCAGTATTATATGATCTTGAGTACAGATATAATCAAGATATTATATATACAAAAGCAGGACCAGTTCTGGTTGCTATCAATCCTTTTAAGAAAGTTGATTTGTATGGAAATGATTACATTGAAGCATATAAACGCAAAACAATTGAGAGCCCACACGTATACGCCATTACGGATACAGCCATAAGAGAGATGATTCGAGATGAAGTAAATCAATCAATTATAATAAGCGGTGAAAGTGGAGCTGGAAAAACTGAAACAGCAAAGATAGCAATGCAATATTTGGCGGCTCTTGGCGGTGGAAGTGGAATAGAATACGAGATATTAAAGACCAATCCTATCTTAGAAGCTTTTGGAAATGCAAAAACATTGAGAAATGATAACTCAAGCCGTTTTGGAAAATTGATAGAAATCCATTTTAGTGAAACTGGGAAAATATCCGGTGCAAATATTCAAACTTGTAAGCTTTCCTGTAATTTGGACTCTGCATTGGTTTTCAATATGGTAAATCTGACTTTGATTGTTCTTTTCTTGATGAACCCCAAACAGTTTTGCTTGAAAAGACTACTTGAGAATGATATATTTCTTCAACAGTCCAGAGTTGTCCAATGCACAGAGGGAGAGAGGTCATACCACATCTTTTATCAACTTTGTAGTGGGGCTCCGCCTGCACTTAAAGAGAGGCTAAACTTGAGAAGAGCGGAAGAGTACAAATACCTCAGCCAGAGCAGTTGTATTTCAATAAGTAGAGTAAATGATGCGGAGGAGTTTCGTGTAGTCATGGAAGCACTAGATGTCGTACATATTAGTAAAGAAGACCAGCACAGTGTATTTGCAATGCTTGCTGCTGTTCTTTGGCTGGGAAATGTTTCCTTTAGTGTTATAGACAATGAAAATCATGTGGAGGCTGTGGAAGATGAAGGTTTACAGACTGTTGCTAAACTTATTGGGTGTGAGATTGAGGAGCTTAAACTAGCTCTATCAACTCGAAAAATGAGAATAGGGAACGACAGCATTGCAATTGACACTAGAGATGCTTTGGCAAAGTCAATTTACGCTTGTTTGTTTGAGTGGCTGGTCGAACAAATTAACAAATCTCTTGCTGTAGGCAAACGGCGCACTGGCAGATCCATCAGCATTCTTGATATCTATGGCTTTGAATCATTTGATAGGAATAGTTTTGAACAGTTCTGTATTAACTATGCAAATGAGAGACTACAGCAGCATTTCAATCGTCATCTATTTAAGCTGGAGCAGGAGGAATATATTCAAGATGGAATCGACTGGGCAAAAGTTGATTTCGACGACAACCAAGATTGTCTCAGTCTGTTTGAAAAGAAACCTTTGGGATTGTTGTCCCTGTTAGATGAGGAGTCTACTTTTCCAAATGGCACAGATGTGACCTTTGCGAACAAGCTTAAGCAGCATTTGGCACCCAATCCTTCTTTTAGAGGAGAACGAGAGAAAGCCTTCACTGTCTGTCATTATGCAGGAGAGGTCACTTATGACACAACTGGGTTTCTGGAGAAAAACAGGGACTTGCTACATTTAGATTCCATACAACTCCTATCCTCATGTTCATGTCATCTTCCTCAAATTTTTGCATCCAACATGCTAACTCAATCAGGAAAGTCCATAGGTGGCCCTTTACATAAGTCTGGTGGTGCAGAATCCCAAAAACTAAGCGTCGCAAGAAAGTTTAAGGGTCAATTATTCCAATTGATGCACCGTCTTGAAAATACAACGCCCCATTTCATCCGTTGCATCAAGCCCAACAATGTTCAGTCTCCTAGATTGTCGGAGCAAGGACTTGTATTACAACAGTTAAGATGTTGTGGGGTCCTAGAAGTGGTACGAATATCACGAGCTGGTTTTCCCACCCGGATGTCACATCAGAAATTTGCTAGAAGGTATGGTTTTCTTCTGCAAGAAAGCATTGCATCGCAGGATCCACTAAGTGTCTCAGTTGCGATTCTTCATCAATTCAATATATTGCCGGAAATGTACCAAGTTGGCTATACAAAATTGTTCTTCCGAACTGGACAGATTGGAATGCTTGAAGATACAAGAAACCGCACCCTCCATGGGATTCTCTGTGTTCAAAGCTGTTATAGAGGGCACCTAGCTCGTCGCCATCTCAAAGAGCTGAAGAAAGGGATTTTCGTACTTCAGTCATTTGCACGTGGGGAGAAAACCAGAAAAGAATATGCAATCTTGATACGAAGGCATAGGGCTGCTATTTCTATTCAGAAGTGTGTGAAAGCCAGAATTGCTGAAAAACGTTTGAAGAAAGTCTGTGATGCATCACTTCTGATACAATCGGTTATCCGTGGCTGTTTGGTCAGGAGATGCTCAGGAGATATAGGATTAATGAAACCTGGTGGCCTGACGGCAAACGAGTCAGGTGAGGTGCTTGTTAAGGCATCATTCCTTTCAGAATTACAGCGCCGTGTCCTGAAGGCAGAGGCTGCTTTGAGAGAGAAAGAAGAGGAAAACGACATCCTCCACCAGCACCTCCAGCAGTACGAGAACCGTTGGTCAGAGTATGAGCTGAAAATGAAATCAATGGAAGAGGTGTGGCAGAGACAAATGAGATCCCTGCAGTCCAGCCTCTCCATTGCAAAGAAAAGCTTAGCAGTTGATGATTCAGAGAGAAATTCTGATGCATCAGTCAATGCAAGTGATGACAGAGGATACAGTTGGGAAGTGGGTAGCAACAACACAACTAATGAAAGCAATGGAGTAAGACCAATGAATGCAGGTCTCAGTGTCATTAGCCGCTTGGCCGAAGAATTCGAACAAAGAAGTCAAGTCTTCGGCGACGATGCCAAGTTCTTAGTAGAGGTAAAATCCGGTCAAGTCGAGGCAAGTCTTGATCCAGATAGGGAACTAAGAAGGTTGAAGCAGATGTTTGAAGCATGGAAGAAAGATTACGGGGGAAGGCTGCGCGAAACAAAAGTGATTTTGAATAAGCTTGGGAATGAAGGTGCCATGGATAGAGTGAAAAAGAAATGGTGGGGAAGGAGGAACAGCACAAGGTATAGTTAA | 3624 | 41.56 | MSRKSQVMPSLQATKSMPVNSRFMIPQTAETLEEPYNQNVKNMEGRSIVDGENGVARDDGVNRLQYSMNNIDELNEDSPYIYNITTVEERPIVDDGEDGFMPLPSPSMSASQSERRWGDTSSYTPRKILKSWFKLPNGNWDLVKILSTAGTESVVSLTDGKVLKVKAEDLIPANPDILDGVDDLMQLSYLNEPSVLYDLEYRYNQDIIYTKAGPVLVAINPFKKVDLYGNDYIEAYKRKTIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTCKLSCNLDSALVFNMVNLTLIVLFLMNPKQFCLKRLLENDIFLQQSRVVQCTEGERSYHIFYQLCSGAPPALKERLNLRRAEEYKYLSQSSCISISRVNDAEEFRVVMEALDVVHISKEDQHSVFAMLAAVLWLGNVSFSVIDNENHVEAVEDEGLQTVAKLIGCEIEELKLALSTRKMRIGNDSIAIDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFDDNQDCLSLFEKKPLGLLSLLDEESTFPNGTDVTFANKLKQHLAPNPSFRGEREKAFTVCHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSCSCHLPQIFASNMLTQSGKSIGGPLHKSGGAESQKLSVARKFKGQLFQLMHRLENTTPHFIRCIKPNNVQSPRLSEQGLVLQQLRCCGVLEVVRISRAGFPTRMSHQKFARRYGFLLQESIASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGMLEDTRNRTLHGILCVQSCYRGHLARRHLKELKKGIFVLQSFARGEKTRKEYAILIRRHRAAISIQKCVKARIAEKRLKKVCDASLLIQSVIRGCLVRRCSGDIGLMKPGGLTANESGEVLVKASFLSELQRRVLKAEAALREKEEENDILHQHLQQYENRWSEYELKMKSMEEVWQRQMRSLQSSLSIAKKSLAVDDSERNSDASVNASDDRGYSWEVGSNNTTNESNGVRPMNAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLDPDRELRRLKQMFEAWKKDYGGRLRETKVILNKLGNEGAMDRVKKKWWGRRNSTRYS | 1207 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 6860892 | 6873032 | + | Cp4.1LG01g10240.1 | Cpe01g01154 | 462467 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe01g01154 | 1207 | Gene3D | Kinesin motor domain | 742 | 816 | IPR036961 | - | |
| Cpe01g01154 | 1207 | SMART | iq_5 | 956 | 978 | IPR000048 | GO:0005515 | |
| Cpe01g01154 | 1207 | SMART | iq_5 | 884 | 906 | IPR000048 | GO:0005515 | |
| Cpe01g01154 | 1207 | SMART | iq_5 | 933 | 955 | IPR000048 | GO:0005515 | |
| Cpe01g01154 | 1207 | SMART | iq_5 | 907 | 929 | IPR000048 | GO:0005515 | |
| Cpe01g01154 | 1207 | PANTHER | P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN | 102 | 350 | - | - | |
| Cpe01g01154 | 1207 | MobiDBLite | consensus disorder prediction | 1091 | 1107 | - | - | |
| Cpe01g01154 | 1207 | Gene3D | Kinesin motor domain | 174 | 352 | IPR036961 | - | |
| Cpe01g01154 | 1207 | PANTHER | P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN | 387 | 1205 | - | - | |
| Cpe01g01154 | 1207 | Gene3D | - | 401 | 459 | - | - | |
| Cpe01g01154 | 1207 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 462 | 584 | - | - | |
| Cpe01g01154 | 1207 | Coils | Coil | 1003 | 1051 | - | - | |
| Cpe01g01154 | 1207 | ProSiteProfiles | IQ motif profile. | 887 | 912 | IPR000048 | GO:0005515 | |
| Cpe01g01154 | 1207 | Gene3D | - | 888 | 935 | - | - | |
| Cpe01g01154 | 1207 | Gene3D | - | 936 | 977 | - | - | |
| Cpe01g01154 | 1207 | MobiDBLite | consensus disorder prediction | 1074 | 1107 | - | - | |
| Cpe01g01154 | 1207 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 126 | 175 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Cpe01g01154 | 1207 | PANTHER | MYOSIN | 387 | 1205 | - | - | |
| Cpe01g01154 | 1207 | ProSiteProfiles | Myosin motor domain profile. | 179 | 883 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cpe01g01154 | 1207 | SMART | MYSc_2a | 173 | 884 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cpe01g01154 | 1207 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 152 | 932 | IPR027417 | - | |
| Cpe01g01154 | 1207 | Gene3D | - | 585 | 726 | - | - | |
| Cpe01g01154 | 1207 | PANTHER | MYOSIN | 102 | 350 | - | - | |
| Cpe01g01154 | 1207 | CDD | MYSc_Myo8 | 193 | 871 | IPR036022 | - | |
| Cpe01g01154 | 1207 | Pfam | IQ calmodulin-binding motif | 960 | 975 | IPR000048 | GO:0005515 | |
| Cpe01g01154 | 1207 | Pfam | IQ calmodulin-binding motif | 889 | 906 | IPR000048 | GO:0005515 | |
| Cpe01g01154 | 1207 | Pfam | Myosin head (motor domain) | 387 | 871 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cpe01g01154 | 1207 | Pfam | Myosin head (motor domain) | 181 | 345 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cpe01g01154 | 1207 | Gene3D | - | 817 | 884 | - | - | |
| Cpe01g01154 | 1207 | PRINTS | Myosin heavy chain signature | 305 | 332 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cpe01g01154 | 1207 | PRINTS | Myosin heavy chain signature | 622 | 650 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cpe01g01154 | 1207 | PRINTS | Myosin heavy chain signature | 209 | 228 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cpe01g01154 | 1207 | PRINTS | Myosin heavy chain signature | 263 | 288 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cpe01g01154 | 1207 | PRINTS | Myosin heavy chain signature | 569 | 597 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cpe01g01154 | 1207 | ProSiteProfiles | IQ motif profile. | 908 | 937 | IPR000048 | GO:0005515 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe01g01154 | Cpe-Chr1:6860892 | Cpe02g00725 | Cpe-Chr2:4617228 | 0 | dispersed | |
| Cpe01g01154 | Cpe-Chr1:6860892 | Cpe09g00494 | Cpe-Chr9:3270166 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe01g01154 | - | K10357 | csv:101222101 | 2119.35 |