Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe01g01195 | ATGGATCGATTTCCCAATGATCTCGACGAAGAAATATGCATCACGGAGAAATTTGAGAGAGAGGAAGACGACGACGACGAGCAAGAAGATGGAGAAGACGGCTGGGATGATTGGAATGCAGACGAGGAAGGAAGCGAAGAAGCATTTGATTCGAATTTTCTGTGTCTGTTCTGCAACTCGAAGTATAATGACTGCGATGCGCTGTTCAATCACTGCAACTTGGTTCACTACTTCGATTTTCATGGCATCAGGAGGACTCTGGGTTTAGACTTTTATGGTTCGTTCAAAGTTATCAACTACATACGATCTCAGGTAGCAGAAAACAGATGTTGGAGCTGTGGTTTCTTGTGTCAATCAAACCAGGATTTACAGAACCATTTACACAAAACACTAAATCTCAGTGACGTAAAGGCTTTGTGGGATGATGATAAATATCTAAATCCCTTCAGGCAAGACGATCCGCTCCTGTACAATTTTGCAGAAGACGAAGAGGATGATGAAATTTCACTCATTAACAATGATCTTCAGAGGAGTGCGGGTACCGAGGGAGGTAATTGCAATCGTGATGAAATGAGTAGAGAAAATCTTCCATTTCATCCAAACCAGAACAAAGAAAATGGAATGGAAGATTGTTGTTCATCTTTACATGGTTATTTGAATGCTCCAAGCAACTTAGAGGCTGAGATTGAGAATACTGTGAAAACCACAGAAATCTTGGGACTGAAAGACGATCGATTAAAAATAGCCAGACGAAATGTTGATAGAATGGATATCAAGAATGCAAATGTAAATTACTTTGATTCATATAGCTCTTTTGGCATACACAGAGAGATGTTAAGCGACAAGGTCAGAACGGAAGCCTATATGCATGCTATTTTGCAAAATCCATCTCTCTTCCACAATGCAGCTGTGATGGATGTAGGCTGTGGAACAGGCATACTTAGTCTCTTTGCTGCAAAAGCGGGTGCATCGAGAGTTCTTGCGGTTGAAGCGAGTGAAAAGATGGCTACAGTGGCCACCCAAATTGCTAAAGACAATGGCCTCTGGCAGAACGGGAAACAGACTGGAGATTGCGGCGTGTCAAGTGGGACTATAGAAGTGGTTCATGGTATGGTAGAAGAACTTGATAAGAACATAGAGATTCAGCCTCACAGTGTTGACGTATTAGTGAGTGAATGGATGGGGTATTGCTTGCTGTATGAGTCAATGCTCAATTCAGTGCTCTTTGCGAGGGATCGTTGGTTGAAGCCTGGAGGTGCAATCTTACCAGATACTGCCACAATTCTTGTTGCAGGATTTGGAGCTGGTGGAACTAGTCTTCCATTTTGGGAAAATGTGTATGGTTTCAGCATGTCTTGTGTTGGGAAGGAACTTGTAAAGGATGCTGCCAAAGCTCCCATCGTCGACATTGTGGATGCTAATGATTTGGTAACTAGTACTGCAATTCTCCATACTTTCGATCTTGCAACTATGCATCCTGATGAAGTAGACTTCACTGCAAGTACGGACTTGGAACCAAATTTACATTATCCTTCAAGCAACTCAGATAATGTTGAAGTTGAAGCATCTTGGTGTCACGGAGTTGTCCTATGGTTTGAAACTGGTTTCACAAGCAGATTTTGCAAGGAATCACCGGCTGTTCTGTCTACATCTCCCCACACTCCCAAAACTCACTGGTCTCAAACCATATTAACCTTCACAGAGCCAATTGCTATAACATCTAGAAAATCTGCCACCAACAAATCAGCACCAGTAGGTAGCCATGCCTCCCCTGCTGTCAAAGTTCATTTACGCCTTAGCATTGTCCGTGCGCCCGAACATCGAAGCATTGATATTTCACTAGAGATTACTGGGATTGCTGGTGATGGTCGGAACCGCGACTGGCCTGTACAACTTTTCACATTAAGATAG | 1911 | 42.91 | MDRFPNDLDEEICITEKFEREEDDDDEQEDGEDGWDDWNADEEGSEEAFDSNFLCLFCNSKYNDCDALFNHCNLVHYFDFHGIRRTLGLDFYGSFKVINYIRSQVAENRCWSCGFLCQSNQDLQNHLHKTLNLSDVKALWDDDKYLNPFRQDDPLLYNFAEDEEDDEISLINNDLQRSAGTEGGNCNRDEMSRENLPFHPNQNKENGMEDCCSSLHGYLNAPSNLEAEIENTVKTTEILGLKDDRLKIARRNVDRMDIKNANVNYFDSYSSFGIHREMLSDKVRTEAYMHAILQNPSLFHNAAVMDVGCGTGILSLFAAKAGASRVLAVEASEKMATVATQIAKDNGLWQNGKQTGDCGVSSGTIEVVHGMVEELDKNIEIQPHSVDVLVSEWMGYCLLYESMLNSVLFARDRWLKPGGAILPDTATILVAGFGAGGTSLPFWENVYGFSMSCVGKELVKDAAKAPIVDIVDANDLVTSTAILHTFDLATMHPDEVDFTASTDLEPNLHYPSSNSDNVEVEASWCHGVVLWFETGFTSRFCKESPAVLSTSPHTPKTHWSQTILTFTEPIAITSRKSATNKSAPVGSHASPAVKVHLRLSIVRAPEHRSIDISLEITGIAGDGRNRDWPVQLFTLR | 636 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 7119928 | 7123861 | - | Cp4.1LG01g09690.1 | Cpe01g01195 | 462508 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe01g01195 | 636 | CDD | AdoMet_MTases | 304 | 422 | - | - | |
Cpe01g01195 | 636 | Gene3D | Vaccinia Virus protein VP39 | 253 | 423 | IPR029063 | - | |
Cpe01g01195 | 636 | Pfam | Methyltransferase domain | 304 | 419 | IPR041698 | - | |
Cpe01g01195 | 636 | PANTHER | PROTEIN ARGININE N-METHYLTRANSFERASE 3-RELATED | 23 | 634 | - | - | |
Cpe01g01195 | 636 | Gene3D | - | 426 | 626 | - | - | |
Cpe01g01195 | 636 | ProSiteProfiles | SAM-dependent methyltransferase PRMT-type domain profile. | 262 | 590 | IPR025799 | GO:0016274|GO:0018216 | |
Cpe01g01195 | 636 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 268 | 574 | IPR029063 | - | |
Cpe01g01195 | 636 | Pfam | C2H2 type zinc-finger (2 copies) | 55 | 129 | IPR041661 | - | |
Cpe01g01195 | 636 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 55 | 76 | IPR013087 | - | |
Cpe01g01195 | 636 | PANTHER | PROTEIN ARGININE N-METHYLTRANSFERASE | 23 | 634 | IPR025799 | GO:0016274|GO:0018216 | |
Cpe01g01195 | 636 | MobiDBLite | consensus disorder prediction | 18 | 42 | - | - | |
Cpe01g01195 | 636 | SUPERFAMILY | beta-beta-alpha zinc fingers | 30 | 167 | IPR036236 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe01g01195 | Cpe17g00713 | CCT | |
Cpe01g01195 | Cpe12g00853 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g01195 | Cpe-Chr1:7119928 | Cpe04g01068 | Cpe-Chr4:9386123 | 6.66E-69 | dispersed | |
Cpe01g01195 | Cpe-Chr1:7119928 | Cpe09g00458 | Cpe-Chr9:2984775 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe01g01195 | K11436 | - | csv:101215999 | 1008.82 |