Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01195 ATGGATCGATTTCCCAATGATCTCGACGAAGAAATATGCATCACGGAGAAATTTGAGAGAGAGGAAGACGACGACGACGAGCAAGAAGATGGAGAAGACGGCTGGGATGATTGGAATGCAGACGAGGAAGGAAGCGAAGAAGCATTTGATTCGAATTTTCTGTGTCTGTTCTGCAACTCGAAGTATAATGACTGCGATGCGCTGTTCAATCACTGCAACTTGGTTCACTACTTCGATTTTCATGGCATCAGGAGGACTCTGGGTTTAGACTTTTATGGTTCGTTCAAAGTTATCAACTACATACGATCTCAGGTAGCAGAAAACAGATGTTGGAGCTGTGGTTTCTTGTGTCAATCAAACCAGGATTTACAGAACCATTTACACAAAACACTAAATCTCAGTGACGTAAAGGCTTTGTGGGATGATGATAAATATCTAAATCCCTTCAGGCAAGACGATCCGCTCCTGTACAATTTTGCAGAAGACGAAGAGGATGATGAAATTTCACTCATTAACAATGATCTTCAGAGGAGTGCGGGTACCGAGGGAGGTAATTGCAATCGTGATGAAATGAGTAGAGAAAATCTTCCATTTCATCCAAACCAGAACAAAGAAAATGGAATGGAAGATTGTTGTTCATCTTTACATGGTTATTTGAATGCTCCAAGCAACTTAGAGGCTGAGATTGAGAATACTGTGAAAACCACAGAAATCTTGGGACTGAAAGACGATCGATTAAAAATAGCCAGACGAAATGTTGATAGAATGGATATCAAGAATGCAAATGTAAATTACTTTGATTCATATAGCTCTTTTGGCATACACAGAGAGATGTTAAGCGACAAGGTCAGAACGGAAGCCTATATGCATGCTATTTTGCAAAATCCATCTCTCTTCCACAATGCAGCTGTGATGGATGTAGGCTGTGGAACAGGCATACTTAGTCTCTTTGCTGCAAAAGCGGGTGCATCGAGAGTTCTTGCGGTTGAAGCGAGTGAAAAGATGGCTACAGTGGCCACCCAAATTGCTAAAGACAATGGCCTCTGGCAGAACGGGAAACAGACTGGAGATTGCGGCGTGTCAAGTGGGACTATAGAAGTGGTTCATGGTATGGTAGAAGAACTTGATAAGAACATAGAGATTCAGCCTCACAGTGTTGACGTATTAGTGAGTGAATGGATGGGGTATTGCTTGCTGTATGAGTCAATGCTCAATTCAGTGCTCTTTGCGAGGGATCGTTGGTTGAAGCCTGGAGGTGCAATCTTACCAGATACTGCCACAATTCTTGTTGCAGGATTTGGAGCTGGTGGAACTAGTCTTCCATTTTGGGAAAATGTGTATGGTTTCAGCATGTCTTGTGTTGGGAAGGAACTTGTAAAGGATGCTGCCAAAGCTCCCATCGTCGACATTGTGGATGCTAATGATTTGGTAACTAGTACTGCAATTCTCCATACTTTCGATCTTGCAACTATGCATCCTGATGAAGTAGACTTCACTGCAAGTACGGACTTGGAACCAAATTTACATTATCCTTCAAGCAACTCAGATAATGTTGAAGTTGAAGCATCTTGGTGTCACGGAGTTGTCCTATGGTTTGAAACTGGTTTCACAAGCAGATTTTGCAAGGAATCACCGGCTGTTCTGTCTACATCTCCCCACACTCCCAAAACTCACTGGTCTCAAACCATATTAACCTTCACAGAGCCAATTGCTATAACATCTAGAAAATCTGCCACCAACAAATCAGCACCAGTAGGTAGCCATGCCTCCCCTGCTGTCAAAGTTCATTTACGCCTTAGCATTGTCCGTGCGCCCGAACATCGAAGCATTGATATTTCACTAGAGATTACTGGGATTGCTGGTGATGGTCGGAACCGCGACTGGCCTGTACAACTTTTCACATTAAGATAG 1911 42.91 MDRFPNDLDEEICITEKFEREEDDDDEQEDGEDGWDDWNADEEGSEEAFDSNFLCLFCNSKYNDCDALFNHCNLVHYFDFHGIRRTLGLDFYGSFKVINYIRSQVAENRCWSCGFLCQSNQDLQNHLHKTLNLSDVKALWDDDKYLNPFRQDDPLLYNFAEDEEDDEISLINNDLQRSAGTEGGNCNRDEMSRENLPFHPNQNKENGMEDCCSSLHGYLNAPSNLEAEIENTVKTTEILGLKDDRLKIARRNVDRMDIKNANVNYFDSYSSFGIHREMLSDKVRTEAYMHAILQNPSLFHNAAVMDVGCGTGILSLFAAKAGASRVLAVEASEKMATVATQIAKDNGLWQNGKQTGDCGVSSGTIEVVHGMVEELDKNIEIQPHSVDVLVSEWMGYCLLYESMLNSVLFARDRWLKPGGAILPDTATILVAGFGAGGTSLPFWENVYGFSMSCVGKELVKDAAKAPIVDIVDANDLVTSTAILHTFDLATMHPDEVDFTASTDLEPNLHYPSSNSDNVEVEASWCHGVVLWFETGFTSRFCKESPAVLSTSPHTPKTHWSQTILTFTEPIAITSRKSATNKSAPVGSHASPAVKVHLRLSIVRAPEHRSIDISLEITGIAGDGRNRDWPVQLFTLR 636
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7119928 7123861 - Cp4.1LG01g09690.1 Cpe01g01195 462508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01195 636 CDD AdoMet_MTases 304 422 - -
Cpe01g01195 636 Gene3D Vaccinia Virus protein VP39 253 423 IPR029063 -
Cpe01g01195 636 Pfam Methyltransferase domain 304 419 IPR041698 -
Cpe01g01195 636 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 3-RELATED 23 634 - -
Cpe01g01195 636 Gene3D - 426 626 - -
Cpe01g01195 636 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 262 590 IPR025799 GO:0016274|GO:0018216
Cpe01g01195 636 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 268 574 IPR029063 -
Cpe01g01195 636 Pfam C2H2 type zinc-finger (2 copies) 55 129 IPR041661 -
Cpe01g01195 636 ProSitePatterns Zinc finger C2H2 type domain signature. 55 76 IPR013087 -
Cpe01g01195 636 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 23 634 IPR025799 GO:0016274|GO:0018216
Cpe01g01195 636 MobiDBLite consensus disorder prediction 18 42 - -
Cpe01g01195 636 SUPERFAMILY beta-beta-alpha zinc fingers 30 167 IPR036236 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01195 Cpe17g00713 CCT
Cpe01g01195 Cpe12g00853 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01195 Cpe-Chr1:7119928 Cpe04g01068 Cpe-Chr4:9386123 6.66E-69 dispersed
Cpe01g01195 Cpe-Chr1:7119928 Cpe09g00458 Cpe-Chr9:2984775 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01195 K11436 - csv:101215999 1008.82