Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01205 ATGGCCCTTGTCTCTTCTAATGCTCAATTCCATGTCTTGGCTGTCGATGACAGCCTTGTTGACAGGAAGCTGATTGAAAGGCTGCTCAAAACTTCCTCCTTCAATGTTACGGCTGTGGATTCTGGAAGCAAGGCTTTGGAGCTTCTGGGTTTGGTTAGAGAGAGAAATGGAAGCATCCATTCTCCTTTTCCCCCTGAAAATCATCATCATCAACATCATCAAGAGATTGAAGTTAATCTCATCATTACAGATTACTGTATGCCAGAAATGACAGGCTATGATCTTCTAAGAAAGATCAAGGCAAGAAAATCCTATCTGGTTTTGCAGGAATCTGACTCACTTAAAGACATACCTGTTGTGATTATGTCCTCTGAGAATGTTCCAGCAAGAATCAACAGATGTCTAGAAGAAGGAGCTGAGGAGTTTTTGCTGAAACCAGTGAAATTATCTGATGTCAACAAGCTTAAGCCTTTCATATGCAGAGGAAAAGCCAAGGAAATGGATTGCAACAATCTCAAGAGAAAGGAAATGGAACAGAGTCAATCATCTGAGAGAACAAGAGCAAAATACAATGAACCTCTCTAA 585 40.68 MALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPFPPENHHHQHHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVIMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQSQSSERTRAKYNEPL 194
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7200609 7202424 + Cp4.1LG01g15020.1 Cpe01g01205 462518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01205 194 CDD REC_typeA_ARR 12 155 - -
Cpe01g01205 194 SMART REC_2 10 156 IPR001789 GO:0000160
Cpe01g01205 194 MobiDBLite consensus disorder prediction 171 194 - -
Cpe01g01205 194 Pfam Response regulator receiver domain 12 152 IPR001789 GO:0000160
Cpe01g01205 194 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 4 192 - -
Cpe01g01205 194 Gene3D - 11 192 - -
Cpe01g01205 194 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 192 IPR045279 GO:0009736
Cpe01g01205 194 SUPERFAMILY CheY-like 10 152 IPR011006 -
Cpe01g01205 194 ProSiteProfiles Response regulatory domain profile. 11 160 IPR001789 GO:0000160
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01205 Cpe-Chr1:7200609 Cpe01g01415 Cpe-Chr1:8503744 1.75E-49 dispersed
Cpe01g01205 Cpe-Chr1:7200609 Cpe19g00016 Cpe-Chr19:135237 8.68E-53 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
48833 PF00072 Response_reg 1.20E-17 CL0304 Cpe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01205 K14492 - csv:101207245 273.863