Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe01g01205 | ATGGCCCTTGTCTCTTCTAATGCTCAATTCCATGTCTTGGCTGTCGATGACAGCCTTGTTGACAGGAAGCTGATTGAAAGGCTGCTCAAAACTTCCTCCTTCAATGTTACGGCTGTGGATTCTGGAAGCAAGGCTTTGGAGCTTCTGGGTTTGGTTAGAGAGAGAAATGGAAGCATCCATTCTCCTTTTCCCCCTGAAAATCATCATCATCAACATCATCAAGAGATTGAAGTTAATCTCATCATTACAGATTACTGTATGCCAGAAATGACAGGCTATGATCTTCTAAGAAAGATCAAGGCAAGAAAATCCTATCTGGTTTTGCAGGAATCTGACTCACTTAAAGACATACCTGTTGTGATTATGTCCTCTGAGAATGTTCCAGCAAGAATCAACAGATGTCTAGAAGAAGGAGCTGAGGAGTTTTTGCTGAAACCAGTGAAATTATCTGATGTCAACAAGCTTAAGCCTTTCATATGCAGAGGAAAAGCCAAGGAAATGGATTGCAACAATCTCAAGAGAAAGGAAATGGAACAGAGTCAATCATCTGAGAGAACAAGAGCAAAATACAATGAACCTCTCTAA | 585 | 40.68 | MALVSSNAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSIHSPFPPENHHHQHHQEIEVNLIITDYCMPEMTGYDLLRKIKARKSYLVLQESDSLKDIPVVIMSSENVPARINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDCNNLKRKEMEQSQSSERTRAKYNEPL | 194 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 7200609 | 7202424 | + | Cp4.1LG01g15020.1 | Cpe01g01205 | 462518 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe01g01205 | 194 | CDD | REC_typeA_ARR | 12 | 155 | - | - | |
Cpe01g01205 | 194 | SMART | REC_2 | 10 | 156 | IPR001789 | GO:0000160 | |
Cpe01g01205 | 194 | MobiDBLite | consensus disorder prediction | 171 | 194 | - | - | |
Cpe01g01205 | 194 | Pfam | Response regulator receiver domain | 12 | 152 | IPR001789 | GO:0000160 | |
Cpe01g01205 | 194 | PANTHER | RESPONSE REGULATOR ARR8, PUTATIVE-RELATED | 4 | 192 | - | - | |
Cpe01g01205 | 194 | Gene3D | - | 11 | 192 | - | - | |
Cpe01g01205 | 194 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 4 | 192 | IPR045279 | GO:0009736 | |
Cpe01g01205 | 194 | SUPERFAMILY | CheY-like | 10 | 152 | IPR011006 | - | |
Cpe01g01205 | 194 | ProSiteProfiles | Response regulatory domain profile. | 11 | 160 | IPR001789 | GO:0000160 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g01205 | Cpe-Chr1:7200609 | Cpe01g01415 | Cpe-Chr1:8503744 | 1.75E-49 | dispersed | |
Cpe01g01205 | Cpe-Chr1:7200609 | Cpe19g00016 | Cpe-Chr19:135237 | 8.68E-53 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
48833 | PF00072 | Response_reg | 1.20E-17 | CL0304 | Cpe | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe01g01205 | K14492 | - | csv:101207245 | 273.863 |