Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01236 ATGGCCAAAGACGACGCGACGGCGGCGAGAGGGTTCTCAGGCAAGGACTACCACGACCCTCCACCGGCTCCTCTGTTCGACGCGGCGGAGCTAGGCAAGTGGTCTTTTTACAGGGCCATCATTGCCGAGTTCATCGCCACTCTTCTCTTTCTCTATGTCACCATCTTGACTGTGATTGGCTACAGTAGCCAGACCGACACTGACAAACCCGGCGCCGACGCTTGCGACGGCGTTGGAATCCTCGGCATCGCTTGGGCCTTTGGCGGCATGATCTTCGTCCTTGTCTACTGCACCGCCGGCATTTCAGGTGGGCACATCAACCCGGCGGTGACATTCGGGCTATTCTTAGCCCGGAAGGTGTCGTTGGTGCGGGCAGTGGCGTACATGGTGGCTCAGTGCTTAGGGGCCGTATGTGGGACGGGGCTAGTGAAAGCGTTCCAAAAAGCCTACTACCACAAGTACGGCGGCGGTGCGAACCAACTCGCCCTCGGCTACTCTAAAGGCACAGGCTTGGGGGCTGAAATCGTATTGGCACCACTCCCAATTGGGTTCGCTGTGTTTATGGTTCACTTGGCCACGATCCCCATCACCGGCACCGGCATCAACCCCGCTAGAAGCTTCGGCCCGGCTGTTATCTTGAACCATGAAAAACCGTGGAATGATCAATGGATATTTTGGGTTGGGCCATTCGTGGGAGCCGCCATCGCAGCCTTCTACCACCAGTTCATTTTGAGGGCCGGCGCCGTCAAGGCTCTGGGCTCTTTCAGGAGCAGCCCATCCGTTTGA 786 57.89 MAKDDATAARGFSGKDYHDPPPAPLFDAAELGKWSFYRAIIAEFIATLLFLYVTILTVIGYSSQTDTDKPGADACDGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVAYMVAQCLGAVCGTGLVKAFQKAYYHKYGGGANQLALGYSKGTGLGAEIVLAPLPIGFAVFMVHLATIPITGTGINPARSFGPAVILNHEKPWNDQWIFWVGPFVGAAIAAFYHQFILRAGAVKALGSFRSSPSV 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7408243 7410640 - Cp4.1LG01g14770.1 Cpe01g01236 462549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01236 261 PRINTS Major intrinsic protein family signature 87 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe01g01236 261 PRINTS Major intrinsic protein family signature 183 205 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe01g01236 261 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe01g01236 261 PRINTS Major intrinsic protein family signature 223 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe01g01236 261 PRINTS Major intrinsic protein family signature 124 143 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe01g01236 261 Pfam Major intrinsic protein 31 177 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe01g01236 261 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 9 176 IPR034294 -
Cpe01g01236 261 SUPERFAMILY Aquaporin-like 31 245 IPR023271 -
Cpe01g01236 261 PANTHER AQUAPORIN PIP2-4-RELATED 9 176 - -
Cpe01g01236 261 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 176 258 IPR034294 -
Cpe01g01236 261 ProSitePatterns MIP family signature. 105 113 IPR022357 -
Cpe01g01236 261 CDD MIP 38 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe01g01236 261 Gene3D Glycerol uptake facilitator protein. 23 177 IPR023271 -
Cpe01g01236 261 Gene3D Glycerol uptake facilitator protein. 178 261 IPR023271 -
Cpe01g01236 261 PANTHER AQUAPORIN PIP2-4-RELATED 176 258 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01236 Cpe-Chr1:7408243 Cpe19g00409 Cpe-Chr19:3617325 7.01E-149 dispersed
Cpe01g01236 Cpe-Chr1:7408243 Cpe01g02241 Cpe-Chr1:19049402 2.41E-148 wgd
Cpe01g01236 Cpe-Chr1:7408243 Cpe13g00804 Cpe-Chr13:7202436 2.27E-19 wgd
Cpe01g01236 Cpe-Chr1:7408243 Cpe09g00420 Cpe-Chr9:2660647 1.51E-149 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01236 K09872 - csv:101204956 490.73