Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe01g01265 | ATGAACTGTCTTCAAAACCTTTCAATTCTTATTTTCTCTCCGAGTTTCAGATCATCATCTTTGCCGTTCCAGAGCTTCAAATGCCGACAGAGAAAGCCTGAATTCCAGCTCCGGAATCTGGTGATAAGGAACTTTGCGGATCTACACCGACGTTTTACCGTGAAGGCAGTATCTGGCTCTACATCAAGTGCCGAAATGAGTGGAGCTGAAGTTGATGATCCCGAGGCAGAGGAGGAAAAATCTGAAATATATAGCCATAACATGACAGAAGCTATGGGGGCTGTATTGACATATAGACATGAGCTGGGAATGAACTACAACTTCATTCGTCCAGATTTAATTGTAGGATCGTGCCTACAGACTCCAGAGGATGTTGACAAGCTTCGCAGCATTGGAGTAAAAACAATTTTCTGCTTGCAGCAAGACCCTGATTTGGAATATTTTGGGGTTGACATTGGTGCTATAATAGCATATACAAAGACGTTTGATGATATTGAACATTTGCGAGCTCAGATAAGGGATTTTGATGCATTCGACCTACGGCTAAGGTTACCAGCTGTTGTAAGTAAATTGCATAAAGCCATAAACCGAAATGGTGGAGTGGCTTACATACATTGCACTGCTGGACTTGGAAGAGCTCCTGCTGTTGCGATGGCATACATGTTCTGGGTTCAAGGCTACACACTCAATGAGGCTTTAGAATTACTGCTGAGCAAACGCTCATGCTTCCCAAAAATAGATGCTATTAAAAGTGCAACGGCCGATATTCTTTCAGGATTTAAAAACAAGCCTGTCACTTTATCATGGGAGAATCACCAATGCTCAACTGTAGAAGTATCTGGGCTTGATATTGGATGGGGCCAGAGAATTCCATTAAAATTCGACAAGGAACGAGGTGCATGGATTCTCAATAAGGAACTGCCGGAAGGACGATACGAATACAAGTACATTATTGATGGTGTATGGACATGCAACGAAAACGAGCCGGTCACTCCACCCAACAAAGATGGCCACGTCAACAATTTCATTGAAGTGGTTGAAGATGAGGATCCAGGTAGTGATAGAACCATTCTTCGGGCAAGATTAACCGGAGATGAACCAGAACTCACGACCGAAGAAAGAAGCAAAATAATACAATTTCTAGAAGATTGCCCAGATGAAAATTGA | 1167 | 42.59 | MNCLQNLSILIFSPSFRSSSLPFQSFKCRQRKPEFQLRNLVIRNFADLHRRFTVKAVSGSTSSAEMSGAEVDDPEAEEEKSEIYSHNMTEAMGAVLTYRHELGMNYNFIRPDLIVGSCLQTPEDVDKLRSIGVKTIFCLQQDPDLEYFGVDIGAIIAYTKTFDDIEHLRAQIRDFDAFDLRLRLPAVVSKLHKAINRNGGVAYIHCTAGLGRAPAVAMAYMFWVQGYTLNEALELLLSKRSCFPKIDAIKSATADILSGFKNKPVTLSWENHQCSTVEVSGLDIGWGQRIPLKFDKERGAWILNKELPEGRYEYKYIIDGVWTCNENEPVTPPNKDGHVNNFIEVVEDEDPGSDRTILRARLTGDEPELTTEERSKIIQFLEDCPDEN | 388 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 7587491 | 7594309 | - | Cp4.1LG01g14460.1 | Cpe01g01265 | 462578 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe01g01265 | 388 | Gene3D | Protein tyrosine phosphatase superfamily | 98 | 380 | IPR029021 | - | |
Cpe01g01265 | 388 | CDD | E_set_AMPKbeta_like_N | 264 | 345 | - | - | |
Cpe01g01265 | 388 | PANTHER | PHOSPHOGLUCAN PHOSPHATASE DSP4, CHLOROPLASTIC | 1 | 387 | IPR030079 | GO:0005982|GO:0007623|GO:0019203 | |
Cpe01g01265 | 388 | CDD | DSP_laforin-like | 104 | 251 | IPR045204 | GO:0019203|GO:0046838 | |
Cpe01g01265 | 388 | Pfam | Dual specificity phosphatase, catalytic domain | 161 | 243 | IPR000340 | GO:0008138|GO:0016311 | |
Cpe01g01265 | 388 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 105 | 262 | IPR020422 | GO:0006470|GO:0008138 | |
Cpe01g01265 | 388 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 102 | 247 | IPR029021 | - | |
Cpe01g01265 | 388 | Pfam | Glycogen recognition site of AMP-activated protein kinase | 264 | 348 | IPR032640 | - | |
Cpe01g01265 | 388 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 182 | 240 | IPR000387 | GO:0016311|GO:0016791 | |
Cpe01g01265 | 388 | PANTHER | DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN | 1 | 387 | - | - | |
Cpe01g01265 | 388 | SUPERFAMILY | E set domains | 263 | 345 | IPR014756 | - | |
Cpe01g01265 | 388 | Gene3D | Immunoglobulins | 260 | 352 | IPR013783 | - | |
Cpe01g01265 | 388 | SMART | dsp_5 | 105 | 255 | IPR020422 | GO:0006470|GO:0008138 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g00998 | Cpe-Chr1:5917188 | Cpe01g01265 | Cpe-Chr1:7587491 | 2.40E-41 | dispersed | |
Cpe01g01265 | Cpe-Chr1:7587491 | Cpe11g01148 | Cpe-Chr11:9491701 | 3.48E-06 | dispersed | |
Cpe04g00550 | Cpe-Chr4:5925648 | Cpe01g01265 | Cpe-Chr1:7587491 | 2.10E-31 | transposed | |
Cpe01g01265 | Cpe-Chr1:7587491 | Cpe09g00392 | Cpe-Chr9:2415875 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe01g01265 | - | - | csv:101212390 | 693.73 |