Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01267 GTTGTAAGGGCGAAGAAGAAGGACACAGGAACTGTATATGCATTGAAGATAATGGACAAAAAATTCATCACCAAAGAAAATAAAACTGCTTATGTGAAGTTGGAAAGAATTGTTCTTGATCAGTTGGATCATCCTGACATGGCATTGGAGTCTTGTGAAGGCGGAGAACTTTTTGATCAGATAACTAGGAAAGGTCGTCTGTCAGAGGAAGAAGCTCGGTTTTATACGGCCGAAGTGGTCGATGCCCTCGAATACATACACAACATGGGATTGATACACCGAGATATCAAGCCTGAAAACTTGCTACTTACTTCTGATGGACATATCAAAATAGCTGATTTTGGGAGTGTAAAGCCGATGGTCGATAGCCGAATTACGGTTCTTCCAAATGCAGCATCGGATGATAAAGCTTGTACATTTGTGGGCACTGCTGCATATGTTCCTCCAGAAGTCCTTAATTCTTCCCCTGCAACTTTTGGAAATGACCTTTGGGCGCTCGGGTGCACCGATTTAGATCCGATCAAGAGACCGGGTGCCGGAGCTGAGGGCTATGCATCCCTCAAGAATCATCCCTTCTTTGAGGGGGTTGATTGGAAGAACATAAGAACACAAACCCCTCCCAGGCTTGCCTTAGAAGCTACGACCAATTCAAATGAGACCGACGATGGCTCCGAGTCCTCTTGGAATCCTTCACATATTGGTGACGGTGCATCGAGACAAAACGATGGGAATGCTGGTTCTGCATCAACTTCCGAAGGATCAAATCATATTACTCGACTTGCATCGATAGACTCCTTCGATTCAAAATGGCAACAATTCCTTGATCCTGGAGAATCTGTTCTTATGATCTCAATGGTGAAAAAAATTCAAAAGCTATCAAGCAAAAAGGTTCAGCTCATCCTCACCAACAAACCAAAGTTGATTTATGTTGATCCTTCAAAGCTTATTGTGAAGGGGAATATCATTTGGTCTGACAATCCTAATGATCTCAACATTCAAGTGACCAGTCCTTCAAATTTCAAGATCTGCACACCAAAAAAGATTGCCTCTTTTGAGGACGCGAAACAGCGAGCATGGCAGTGGAAGAAGGCGATCGAGGGGCTTCAGAATCGGTGA 1116 43.73 VVRAKKKDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPDMALESCEGGELFDQITRKGRLSEEEARFYTAEVVDALEYIHNMGLIHRDIKPENLLLTSDGHIKIADFGSVKPMVDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTDLDPIKRPGAGAEGYASLKNHPFFEGVDWKNIRTQTPPRLALEATTNSNETDDGSESSWNPSHIGDGASRQNDGNAGSASTSEGSNHITRLASIDSFDSKWQQFLDPGESVLMISMVKKIQKLSSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNPNDLNIQVTSPSNFKICTPKKIASFEDAKQRAWQWKKAIEGLQNR 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7606062 7609395 + Cp4.1LG01g14520.1 Cpe01g01267 462580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01267 371 Coils Coil 351 371 - -
Cpe01g01267 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 91 103 IPR008271 GO:0004672|GO:0006468
Cpe01g01267 371 PANTHER 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1 1 169 - -
Cpe01g01267 371 PANTHER 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1 170 367 - -
Cpe01g01267 371 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 169 - -
Cpe01g01267 371 PANTHER SERINE/THREONINE-PROTEIN KINASE 170 367 - -
Cpe01g01267 371 ProSiteProfiles Protein kinase domain profile. 1 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g01267 371 SUPERFAMILY Protein kinase-like (PK-like) 1 249 IPR011009 -
Cpe01g01267 371 Pfam Protein kinase domain 1 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g01267 371 SMART serkin_6 1 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g01267 371 MobiDBLite consensus disorder prediction 213 254 - -
Cpe01g01267 371 Gene3D - 238 371 IPR011993 -
Cpe01g01267 371 Gene3D Transferase(Phosphotransferase) domain 1 56 169 - -
Cpe01g01267 371 SUPERFAMILY PH domain-like 187 370 - -
Cpe01g01267 371 Pfam PH domain 268 370 IPR033931 -
Cpe01g01267 371 Gene3D Phosphorylase Kinase; domain 1 1 47 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01267 Cpe09g00390 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01267 Cpe-Chr1:7606062 Cpe05g01329 Cpe-Chr5:9339804 2.26E-32 dispersed
Cpe01g01267 Cpe-Chr1:7606062 Cpe09g00390 Cpe-Chr9:2390952 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62143 PF00069 Pkinase 3.00E-37 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01267 K06276 - csv:101212874 662.914