Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01276 ATGGAGCAGTATGAGAAAGTTGAGAAGATTGGAGAAGGAACTTATGGTGTGGTTTACAAAGCACGCGATCGCGTCACAAATGAGACTATTGCTCTGAAGAAGATCCGCTTGGAGCAGGAAGATGAGGGAGTGCCAAGCACAGCCATTCGTGAAATTTCACTGTTGAAGGAAATGCAGCATGGCAACATTGTAAGGTTGCAAGATGTAGTGCACAGTGAGAAGCGCCTGTATCTTGTTTTTGAGTATCTGGATTTGGATTTGAAGAAGCATATGGACTCCTCTCCTGAATTTGCAAAGGATCCACGCCAAGTGAAAATGTTTCTTTACCAAATTCTTCGTGGCATTGCATATTGTCATTCACATAGAGTTCTTCATCGAGATCTAAAACCCCAAAATCTACTGATAGATCGTCGTACCAATGCCCTGAAGCTTGCTGACTTTGGACTGGCAAGAGCATTTGGTATTCCTGTTAGAACATTCACGCATGAGGTGGTGACCCTTTGGTACAGAGCACCAGAAATATTACTTGGTTCCCGACATTACTCCACCCCTGTGGATGTGTGGTCAGTGGGTTGTATATTTGCTGAGATGGTTAACCAGCGGCCATTATTCCCTGGAGACTCTGAGATTGATGAACTGTTTAAGATATTTAGAGTTCTGGGAACTCCAAATGAAGATACGTGGCCTGGTGTTACATCTTTGCCTGATTTTAAATCTGCTTTCCCCAAGTGGCCTCCAAAGGACTTGGCTTCTGTAGTTCCTAATCTTGAAGCCGCTGGCATTGATCTTCTCTCTAAAATGCTGTGCTTGGATCCCACCAAAAGAGTCACCGCCAGGAGTGCCCTTGAGCATGAATACTTCAAAGATGTTGGGTTTGTTCCCTGA 885 44.41 MEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFAKDPRQVKMFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPPKDLASVVPNLEAAGIDLLSKMLCLDPTKRVTARSALEHEYFKDVGFVP 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7675157 7680553 + Cp4.1LG01g14400.1 Cpe01g01276 462589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01276 294 Pfam Protein kinase domain 4 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g01276 294 CDD STKc_CDK1_CdkB_like 4 287 - -
Cpe01g01276 294 Gene3D Phosphorylase Kinase; domain 1 1 84 - -
Cpe01g01276 294 ProSiteProfiles Protein kinase domain profile. 4 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g01276 294 Gene3D Transferase(Phosphotransferase) domain 1 86 292 - -
Cpe01g01276 294 PANTHER CELL DIVISION PROTEIN KINASE 3 291 - -
Cpe01g01276 294 PANTHER - 3 291 - -
Cpe01g01276 294 SUPERFAMILY Protein kinase-like (PK-like) 1 290 IPR011009 -
Cpe01g01276 294 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Cpe01g01276 294 SMART serkin_6 4 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g01276 294 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01276 Cpe-Chr1:7675157 Cpe19g00180 Cpe-Chr19:1450012 7.72E-101 dispersed
Cpe07g01019 Cpe-Chr7:9229369 Cpe01g01276 Cpe-Chr1:7675157 2.93E-17 dispersed
Cpe08g00898 Cpe-Chr8:7088877 Cpe01g01276 Cpe-Chr1:7675157 2.85E-71 dispersed
Cpe14g01001 Cpe-Chr14:8445154 Cpe01g01276 Cpe-Chr1:7675157 1.84E-68 dispersed
Cpe18g00688 Cpe-Chr18:6860425 Cpe01g01276 Cpe-Chr1:7675157 4.08E-73 dispersed
Cpe19g00086 Cpe-Chr19:665359 Cpe01g01276 Cpe-Chr1:7675157 1.07E-75 dispersed
Cpe01g01276 Cpe-Chr1:7675157 Cpe09g00381 Cpe-Chr9:2301648 1.42E-46 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62144 PF00069 Pkinase 1.00E-80 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01276 K02206 - csv:101217311 590.497