Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe01g01276 | ATGGAGCAGTATGAGAAAGTTGAGAAGATTGGAGAAGGAACTTATGGTGTGGTTTACAAAGCACGCGATCGCGTCACAAATGAGACTATTGCTCTGAAGAAGATCCGCTTGGAGCAGGAAGATGAGGGAGTGCCAAGCACAGCCATTCGTGAAATTTCACTGTTGAAGGAAATGCAGCATGGCAACATTGTAAGGTTGCAAGATGTAGTGCACAGTGAGAAGCGCCTGTATCTTGTTTTTGAGTATCTGGATTTGGATTTGAAGAAGCATATGGACTCCTCTCCTGAATTTGCAAAGGATCCACGCCAAGTGAAAATGTTTCTTTACCAAATTCTTCGTGGCATTGCATATTGTCATTCACATAGAGTTCTTCATCGAGATCTAAAACCCCAAAATCTACTGATAGATCGTCGTACCAATGCCCTGAAGCTTGCTGACTTTGGACTGGCAAGAGCATTTGGTATTCCTGTTAGAACATTCACGCATGAGGTGGTGACCCTTTGGTACAGAGCACCAGAAATATTACTTGGTTCCCGACATTACTCCACCCCTGTGGATGTGTGGTCAGTGGGTTGTATATTTGCTGAGATGGTTAACCAGCGGCCATTATTCCCTGGAGACTCTGAGATTGATGAACTGTTTAAGATATTTAGAGTTCTGGGAACTCCAAATGAAGATACGTGGCCTGGTGTTACATCTTTGCCTGATTTTAAATCTGCTTTCCCCAAGTGGCCTCCAAAGGACTTGGCTTCTGTAGTTCCTAATCTTGAAGCCGCTGGCATTGATCTTCTCTCTAAAATGCTGTGCTTGGATCCCACCAAAAGAGTCACCGCCAGGAGTGCCCTTGAGCATGAATACTTCAAAGATGTTGGGTTTGTTCCCTGA | 885 | 44.41 | MEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFAKDPRQVKMFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPPKDLASVVPNLEAAGIDLLSKMLCLDPTKRVTARSALEHEYFKDVGFVP | 294 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 7675157 | 7680553 | + | Cp4.1LG01g14400.1 | Cpe01g01276 | 462589 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe01g01276 | 294 | Pfam | Protein kinase domain | 4 | 287 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe01g01276 | 294 | CDD | STKc_CDK1_CdkB_like | 4 | 287 | - | - | |
Cpe01g01276 | 294 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 84 | - | - | |
Cpe01g01276 | 294 | ProSiteProfiles | Protein kinase domain profile. | 4 | 287 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe01g01276 | 294 | Gene3D | Transferase(Phosphotransferase) domain 1 | 86 | 292 | - | - | |
Cpe01g01276 | 294 | PANTHER | CELL DIVISION PROTEIN KINASE | 3 | 291 | - | - | |
Cpe01g01276 | 294 | PANTHER | - | 3 | 291 | - | - | |
Cpe01g01276 | 294 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 290 | IPR011009 | - | |
Cpe01g01276 | 294 | ProSitePatterns | Protein kinases ATP-binding region signature. | 10 | 33 | IPR017441 | GO:0005524 | |
Cpe01g01276 | 294 | SMART | serkin_6 | 4 | 287 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe01g01276 | 294 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 123 | 135 | IPR008271 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g01276 | Cpe-Chr1:7675157 | Cpe19g00180 | Cpe-Chr19:1450012 | 7.72E-101 | dispersed | |
Cpe07g01019 | Cpe-Chr7:9229369 | Cpe01g01276 | Cpe-Chr1:7675157 | 2.93E-17 | dispersed | |
Cpe08g00898 | Cpe-Chr8:7088877 | Cpe01g01276 | Cpe-Chr1:7675157 | 2.85E-71 | dispersed | |
Cpe14g01001 | Cpe-Chr14:8445154 | Cpe01g01276 | Cpe-Chr1:7675157 | 1.84E-68 | dispersed | |
Cpe18g00688 | Cpe-Chr18:6860425 | Cpe01g01276 | Cpe-Chr1:7675157 | 4.08E-73 | dispersed | |
Cpe19g00086 | Cpe-Chr19:665359 | Cpe01g01276 | Cpe-Chr1:7675157 | 1.07E-75 | dispersed | |
Cpe01g01276 | Cpe-Chr1:7675157 | Cpe09g00381 | Cpe-Chr9:2301648 | 1.42E-46 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62144 | PF00069 | Pkinase | 1.00E-80 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe01g01276 | K02206 | - | csv:101217311 | 590.497 |